Difference between revisions of "TSS:Hg 102305.1"
From referenceTSS
| Line 2: | Line 2: | ||
|Fwd2= | |Fwd2= | ||
|Md6= | |Md6= | ||
| − | |all_trans=ENST00000474117 | + | |all_trans=ENST00000474117.1:0 BC110334:0 AF145024:-1 AF193594:-1 BC000239:-9 BC018738:-10 ENST00000476481.1:-12 ENST00000453291.1:-14 AK300066:-23 AK091860:-23 AK314385:-23 AK022484:-44 ENST00000608872.6:-48 NM_012164:-48 NM_001375890:-48 NM_001375889:-48 NM_001375888:-48 AF176698:93 DQ598105:237 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=60 |
|end=120793368 | |end=120793368 | ||
|end_of_center_position=120793356 | |end_of_center_position=120793356 | ||
|entrez_id=26190 | |entrez_id=26190 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=FBW2 | + | |gene_alias=FBW2{{!}}Fwd2{{!}}Md6 |
|gene_description=F-box and WD repeat domain containing 2 | |gene_description=F-box and WD repeat domain containing 2 | ||
|gene_id=26190 | |gene_id=26190 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_012164 | |nearest_refseq=NM_012164 | ||
|nearest_unigene=Hs.494985 | |nearest_unigene=Hs.494985 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=120793343 | |start=120793343 | ||
|start_of_center_position=120793355 | |start_of_center_position=120793355 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000474117 | + | |transcript_name=ENST00000474117.1 BC110334 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102305.1 | |tss_id=hg_102305.1 | ||
Revision as of 17:00, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120793355 |
|---|---|
| End of the center position in the TSS region: | 120793356 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000474117.1 BC110334 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000474117.1:0 BC110334:0 AF145024:-1 AF193594:-1 BC000239:-9 BC018738:-10 ENST00000476481.1:-12 ENST00000453291.1:-14 AK300066:-23 AK091860:-23 AK314385:-23 AK022484:-44 ENST00000608872.6:-48 NM_012164:-48 NM_001375890:-48 NM_001375889:-48 NM_001375888:-48 AF176698:93 DQ598105:237 |
TATA-Box annotation
| Distance to TSS: | 60 |
|---|---|
| Nearest PromoterID: | NM_012164 |
| Entrez ID: | 26190 |
| Nearest Unigene: | Hs.494985 |
| Nearest Refseq: | NM_012164 |
| Nearest Ensembl: | ENSG00000119402 |
| Gene Name: | F-box and WD repeat domain containing 2 |
| Gene Alias: | FBW2|Fwd2|Md6 |
| Gene Description: | F-box and WD repeat domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
