Difference between revisions of "TSS:Hg 102307.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000373904.5:0 ENST00000476949.1:0 ENST00000625444.1:0 | + | |all_trans=ENST00000210313.8:0 ENST00000373904.5:0 ENST00000476949.1:0 ENST00000625444.1:0 NM_001270427:0 NM_005047:0 BC014478:0 D31889:0 S79862:0 AK291051:0 AK303007:0 KJ891927:0 DQ892085:0 DQ895279:0 AB464080:0 CU677015:0 LF346984:0 MA582561:0 ENST00000471789.1:18 LF346985:-231 MA582562:-231 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-11 |
|end=120842967 | |end=120842967 | ||
|end_of_center_position=120842934 | |end_of_center_position=120842934 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
|gene_alias=S5B | |gene_alias=S5B | ||
| − | |gene_description= | + | |gene_description=proteasome 26S subunit, non-ATPase 5 |
|gene_id=5711 | |gene_id=5711 | ||
| − | |gene_name= | + | |gene_name=proteasome 26S subunit, non-ATPase 5 |
|gene_source=HGNC:9563 | |gene_source=HGNC:9563 | ||
|gene_symbol=PSMD5 | |gene_symbol=PSMD5 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:9563 | |hgnc_mgi_id=HGNC:9563 | ||
|nearest_ensembl=ENSG00000095261 | |nearest_ensembl=ENSG00000095261 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_005047 |
|nearest_refseq=NM_005047 | |nearest_refseq=NM_005047 | ||
|nearest_unigene=Hs.193725 | |nearest_unigene=Hs.193725 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
|start=120842899 | |start=120842899 | ||
|start_of_center_position=120842933 | |start_of_center_position=120842933 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000373904.5 ENST00000476949.1 ENST00000625444.1 | + | |transcript_name=ENST00000210313.8 ENST00000373904.5 ENST00000476949.1 ENST00000625444.1 NM_001270427 NM_005047 BC014478 D31889 S79862 AK291051 AK303007 KJ891927 DQ892085 DQ895279 AB464080 CU677015 LF346984 MA582561 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102307.1 | |tss_id=hg_102307.1 | ||
Revision as of 17:00, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120842933 |
|---|---|
| End of the center position in the TSS region: | 120842934 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000210313.8 ENST00000373904.5 ENST00000476949.1 ENST00000625444.1 NM_001270427 NM_005047 BC014478 D31889 S79862 AK291051 AK303007 KJ891927 DQ892085 DQ895279 AB464080 CU677015 LF346984 MA582561 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENST00000210313.8:0 ENST00000373904.5:0 ENST00000476949.1:0 ENST00000625444.1:0 NM_001270427:0 NM_005047:0 BC014478:0 D31889:0 S79862:0 AK291051:0 AK303007:0 KJ891927:0 DQ892085:0 DQ895279:0 AB464080:0 CU677015:0 LF346984:0 MA582561:0 ENST00000471789.1:18 LF346985:-231 MA582562:-231 |
TATA-Box annotation
| Distance to TSS: | -11 |
|---|---|
| Nearest PromoterID: | NM_005047 |
| Entrez ID: | 5711 |
| Nearest Unigene: | Hs.193725 |
| Nearest Refseq: | NM_005047 |
| Nearest Ensembl: | ENSG00000095261 |
| Gene Name: | proteasome 26S subunit, non-ATPase 5 |
| Gene Alias: | S5B |
| Gene Description: | proteasome 26S subunit, non-ATPase 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
