Difference between revisions of "TSS:Hg 10232.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF357460:77 MA593037:77 LF357459:-84 MA593036:-84 LF357458:-153 MA593035:-153 LF206735:-173 MA442312:-173 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| − | |distance= | + | |distance=77 |
| − | |distance_to_tss= | + | |distance_to_tss=39060 |
|end=9730533 | |end=9730533 | ||
|end_of_center_position=9730528 | |end_of_center_position=9730528 | ||
| − | |entrez_id= | + | |entrez_id=5293 |
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias= | + | |gene_alias=APDS{{!}}IMD14{{!}}P110DELTA{{!}}PI3K{{!}}p110D |
| − | |gene_description= | + | |gene_description=phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta |
| − | |gene_name=PIK3CD | + | |gene_name=PIK3CD |
| − | |gene_type= | + | |gene_type=protein-coding |
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000171608 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001350235 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_005026 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.518451 |
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=9730521 | |start=9730521 | ||
|start_of_center_position=9730527 | |start_of_center_position=9730527 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF357460 MA593037 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10232.1 | |tss_id=hg_10232.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:00, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 9730527 |
|---|---|
| End of the center position in the TSS region: | 9730528 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF357460 MA593037 |
|---|---|
| Distance: | 77 |
| Num_trans: | 8 |
| All_trans: | LF357460:77 MA593037:77 LF357459:-84 MA593036:-84 LF357458:-153 MA593035:-153 LF206735:-173 MA442312:-173 |
TATA-Box annotation
| Distance to TSS: | 39060 |
|---|---|
| Nearest PromoterID: | NM_001350235 |
| Entrez ID: | 5293 |
| Nearest Unigene: | Hs.518451 |
| Nearest Refseq: | NM_005026 |
| Nearest Ensembl: | ENSG00000171608 |
| Gene Name: | PIK3CD |
| Gene Alias: | APDS|IMD14|P110DELTA|PI3K|p110D |
| Gene Description: | phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
