Difference between revisions of "TSS:Hg 102335.1"
From referenceTSS
| Line 4: | Line 4: | ||
|CPAMD4= | |CPAMD4= | ||
|ECLZB= | |ECLZB= | ||
| + | |all_trans=LF638427:273 LG111906:273 LF638417:337 LF638447:337 LF638448:337 LG111896:337 LG111926:337 LG111927:337 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=273 |
| − | |distance_to_tss= | + | |distance_to_tss=24430 |
|end=121025849 | |end=121025849 | ||
|end_of_center_position=121025845 | |end_of_center_position=121025845 | ||
|entrez_id=727 | |entrez_id=727 | ||
|gc_percent=0.348259 | |gc_percent=0.348259 | ||
| − | |gene_alias=C5D | + | |gene_alias=C5D{{!}}C5a{{!}}C5b{{!}}CPAMD4{{!}}ECLZB |
|gene_description=complement C5 | |gene_description=complement C5 | ||
|gene_name=C5 | |gene_name=C5 | ||
| Line 20: | Line 21: | ||
|nearest_refseq=NM_001735 | |nearest_refseq=NM_001735 | ||
|nearest_unigene=Hs.494997 | |nearest_unigene=Hs.494997 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=121025840 | |start=121025840 | ||
|start_of_center_position=121025844 | |start_of_center_position=121025844 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF638427 LG111906 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102335.1 | |tss_id=hg_102335.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:01, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 121025844 |
|---|---|
| End of the center position in the TSS region: | 121025845 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF638427 LG111906 |
|---|---|
| Distance: | 273 |
| Num_trans: | 8 |
| All_trans: | LF638427:273 LG111906:273 LF638417:337 LF638447:337 LF638448:337 LG111896:337 LG111926:337 LG111927:337 |
TATA-Box annotation
| Distance to TSS: | 24430 |
|---|---|
| Nearest PromoterID: | NM_001317164 |
| Entrez ID: | 727 |
| Nearest Unigene: | Hs.494997 |
| Nearest Refseq: | NM_001735 |
| Nearest Ensembl: | ENSG00000106804 |
| Gene Name: | C5 |
| Gene Alias: | C5D|C5a|C5b|CPAMD4|ECLZB |
| Gene Description: | complement C5 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.348259 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
