Difference between revisions of "TSS:Hg 102350.1"
From referenceTSS
| Line 2: | Line 2: | ||
|EPB7= | |EPB7= | ||
|EPB72= | |EPB72= | ||
| + | |all_trans=LF346994:5 MA582571:5 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=5 |
| − | |distance_to_tss= | + | |distance_to_tss=14140 |
|end=121356120 | |end=121356120 | ||
|end_of_center_position=121356111 | |end_of_center_position=121356111 | ||
|entrez_id=2040 | |entrez_id=2040 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| − | |gene_alias=BND7 | + | |gene_alias=BND7{{!}}EPB7{{!}}EPB72 |
|gene_description=stomatin | |gene_description=stomatin | ||
|gene_name=STOM | |gene_name=STOM | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000148175 | |nearest_ensembl=ENSG00000148175 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_198194 |
|nearest_refseq=NM_004099 | |nearest_refseq=NM_004099 | ||
|nearest_unigene=Hs.253903 | |nearest_unigene=Hs.253903 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=121356100 | |start=121356100 | ||
|start_of_center_position=121356110 | |start_of_center_position=121356110 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF346994 MA582571 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102350.1 | |tss_id=hg_102350.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:01, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 121356110 |
|---|---|
| End of the center position in the TSS region: | 121356111 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF346994 MA582571 |
|---|---|
| Distance: | 5 |
| Num_trans: | 2 |
| All_trans: | LF346994:5 MA582571:5 |
TATA-Box annotation
| Distance to TSS: | 14140 |
|---|---|
| Nearest PromoterID: | NM_198194 |
| Entrez ID: | 2040 |
| Nearest Unigene: | Hs.253903 |
| Nearest Refseq: | NM_004099 |
| Nearest Ensembl: | ENSG00000148175 |
| Gene Name: | STOM |
| Gene Alias: | BND7|EPB7|EPB72 |
| Gene Description: | stomatin |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
