Difference between revisions of "TSS:Hg 102377.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=93920 |entrez_id=158135 |gc_percent=0.457711 |gene_alias=C9orf20|bA244O19.1 |gene_description=tubulin tyrosine ligase like 11 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |bA244O19.1= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=NA | ||
|distance_to_tss=93920 | |distance_to_tss=93920 | ||
| + | |end=121999698 | ||
| + | |end_of_center_position=121999687 | ||
|entrez_id=158135 | |entrez_id=158135 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias=C9orf20 | + | |gene_alias=C9orf20{{!}}bA244O19.1 |
|gene_description=tubulin tyrosine ligase like 11 | |gene_description=tubulin tyrosine ligase like 11 | ||
|gene_name=TTLL11 | |gene_name=TTLL11 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_194252 | |nearest_refseq=NM_194252 | ||
|nearest_unigene=Hs.438937 | |nearest_unigene=Hs.438937 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=121999674 | ||
| + | |start_of_center_position=121999686 | ||
| + | |strand=- | ||
| + | |tata_box=4(CCTTTAATGCCT,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_102377.1 | |tss_id=hg_102377.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:02, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 121999686 |
|---|---|
| End of the center position in the TSS region: | 121999687 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 93920 |
|---|---|
| Nearest PromoterID: | NM_001139442 |
| Entrez ID: | 158135 |
| Nearest Unigene: | Hs.438937 |
| Nearest Refseq: | NM_194252 |
| Nearest Ensembl: | ENSG00000175764 |
| Gene Name: | TTLL11 |
| Gene Alias: | C9orf20|bA244O19.1 |
| Gene Description: | tubulin tyrosine ligase like 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 4(CCTTTAATGCCT,+,0.00) |
