Difference between revisions of "TSS:Hg 102468.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|PP6C= | |PP6C= | ||
| − | |all_trans=AF035158:4 X92972:-4 KJ891876:4 BT019708:4 AB385530:4 KU178271:4 KU178272:4 AK295752:-24 AK312332:-36 ENST00000456642 | + | |all_trans=AF035158:4 X92972:-4 KJ891876:4 BT019708:4 AB385530:4 KU178271:4 KU178272:4 AK295752:-24 AK312332:-36 ENST00000456642.1:-48 BC006990:-51 AK316527:-57 ENST00000373547.9:-68 NM_002721:-68 AK299087:-68 AK295190:-68 ENST00000415905.5:-204 ENST00000451402.5:-204 NM_001123369:-204 NM_001123355:-204 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
|distance=4 | |distance=4 | ||
| − | |distance_to_tss= | + | |distance_to_tss=75 |
|end=125189735 | |end=125189735 | ||
|end_of_center_position=125189729 | |end_of_center_position=125189729 | ||
|entrez_id=5537 | |entrez_id=5537 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=PP6 | + | |gene_alias=PP6{{!}}PP6C |
|gene_description=protein phosphatase 6 catalytic subunit | |gene_description=protein phosphatase 6 catalytic subunit | ||
|gene_id=5537 | |gene_id=5537 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_002721 | |nearest_refseq=NM_002721 | ||
|nearest_unigene=Hs.744091 | |nearest_unigene=Hs.744091 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=125189721 | |start=125189721 | ||
Revision as of 17:04, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 125189728 |
|---|---|
| End of the center position in the TSS region: | 125189729 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF035158 KJ891876 BT019708 AB385530 KU178271 KU178272 |
|---|---|
| Distance: | 4 |
| Num_trans: | 20 |
| All_trans: | AF035158:4 X92972:-4 KJ891876:4 BT019708:4 AB385530:4 KU178271:4 KU178272:4 AK295752:-24 AK312332:-36 ENST00000456642.1:-48 BC006990:-51 AK316527:-57 ENST00000373547.9:-68 NM_002721:-68 AK299087:-68 AK295190:-68 ENST00000415905.5:-204 ENST00000451402.5:-204 NM_001123369:-204 NM_001123355:-204 |
TATA-Box annotation
| Distance to TSS: | 75 |
|---|---|
| Nearest PromoterID: | NM_002721 |
| Entrez ID: | 5537 |
| Nearest Unigene: | Hs.744091 |
| Nearest Refseq: | NM_002721 |
| Nearest Ensembl: | ENSG00000119414 |
| Gene Name: | protein phosphatase 6 catalytic subunit |
| Gene Alias: | PP6|PP6C |
| Gene Description: | protein phosphatase 6 catalytic subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
