Difference between revisions of "TSS:Hg 102471.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|PP6C= | |PP6C= | ||
| − | |all_trans=ENST00000373547. | + | |all_trans=ENST00000373547.9:21 NM_002721:21 AK299087:21 AK295190:21 AK316527:32 BC006990:38 ENST00000456642.1:41 AK312332:53 AK295752:65 X92972:85 ENST00000415905.5:-105 ENST00000451402.5:-105 NM_001123369:-105 NM_001123355:-105 AF035158:106 KJ891876:106 BT019708:106 AB385530:106 KU178271:106 KU178272:106 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| − | |distance= | + | |distance=21 |
| − | |distance_to_tss= | + | |distance_to_tss=-26 |
|end=125189834 | |end=125189834 | ||
|end_of_center_position=125189829 | |end_of_center_position=125189829 | ||
|entrez_id=5537 | |entrez_id=5537 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
| − | |gene_alias=PP6 | + | |gene_alias=PP6{{!}}PP6C |
|gene_description=protein phosphatase 6 catalytic subunit | |gene_description=protein phosphatase 6 catalytic subunit | ||
|gene_id=5537 | |gene_id=5537 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_002721 | |nearest_refseq=NM_002721 | ||
|nearest_unigene=Hs.744091 | |nearest_unigene=Hs.744091 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=125189823 | |start=125189823 | ||
|start_of_center_position=125189828 | |start_of_center_position=125189828 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000373547. | + | |transcript_name=ENST00000373547.9 NM_002721 AK299087 AK295190 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102471.1 | |tss_id=hg_102471.1 | ||
Revision as of 17:04, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 125189828 |
|---|---|
| End of the center position in the TSS region: | 125189829 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000373547.9 NM_002721 AK299087 AK295190 |
|---|---|
| Distance: | 21 |
| Num_trans: | 20 |
| All_trans: | ENST00000373547.9:21 NM_002721:21 AK299087:21 AK295190:21 AK316527:32 BC006990:38 ENST00000456642.1:41 AK312332:53 AK295752:65 X92972:85 ENST00000415905.5:-105 ENST00000451402.5:-105 NM_001123369:-105 NM_001123355:-105 AF035158:106 KJ891876:106 BT019708:106 AB385530:106 KU178271:106 KU178272:106 |
TATA-Box annotation
| Distance to TSS: | -26 |
|---|---|
| Nearest PromoterID: | NM_002721 |
| Entrez ID: | 5537 |
| Nearest Unigene: | Hs.744091 |
| Nearest Refseq: | NM_002721 |
| Nearest Ensembl: | ENSG00000119414 |
| Gene Name: | protein phosphatase 6 catalytic subunit |
| Gene Alias: | PP6|PP6C |
| Gene Description: | protein phosphatase 6 catalytic subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
