Difference between revisions of "TSS:Hg 102483.1"
From referenceTSS
| Line 3: | Line 3: | ||
|HEL-S-89n= | |HEL-S-89n= | ||
|MIF2= | |MIF2= | ||
| − | |all_trans=AF188611:-198 AF216292:-254 DQ892173:-254 DQ895368:-254 AB527282:-254 AJ271729:-267 EU794617:-267 | + | |all_trans=AF188611:-198 AF216292:-254 DQ892173:-254 DQ895368:-254 AB527282:-254 AJ271729:-267 EU794617:-267 BC020235:-458 LP895631:-458 ENST00000680640.1:-470 ENST00000324460.7:-471 NM_005347:-471 AK293604:-471 ENST00000679475.1:-472 ENST00000680494.1:-472 ENST00000681774.1:-472 X87949:-476 ENST00000679355.1:-496 ENST00000681045.1:-496 ENST00000681424.1:-496 ENST00000681675.1:-496 ENST00000681544.1:-496 ENST00000680272.1:-496 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=-198 | |distance=-198 | ||
| − | |distance_to_tss= | + | |distance_to_tss=492 |
|end=125240872 | |end=125240872 | ||
|end_of_center_position=125240851 | |end_of_center_position=125240851 | ||
|entrez_id=3309 | |entrez_id=3309 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=BIP | + | |gene_alias=BIP{{!}}GRP78{{!}}HEL-S-89n{{!}}MIF2 |
|gene_description=heat shock protein family A (Hsp70) member 5 | |gene_description=heat shock protein family A (Hsp70) member 5 | ||
|gene_id=3309 | |gene_id=3309 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_005347 | |nearest_refseq=NM_005347 | ||
|nearest_unigene=Hs.743241 | |nearest_unigene=Hs.743241 | ||
| − | |num_trans= | + | |num_trans=23 |
|species=human | |species=human | ||
|start=125240829 | |start=125240829 | ||
Revision as of 17:04, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 125240850 |
|---|---|
| End of the center position in the TSS region: | 125240851 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AF188611 |
|---|---|
| Distance: | -198 |
| Num_trans: | 23 |
| All_trans: | AF188611:-198 AF216292:-254 DQ892173:-254 DQ895368:-254 AB527282:-254 AJ271729:-267 EU794617:-267 BC020235:-458 LP895631:-458 ENST00000680640.1:-470 ENST00000324460.7:-471 NM_005347:-471 AK293604:-471 ENST00000679475.1:-472 ENST00000680494.1:-472 ENST00000681774.1:-472 X87949:-476 ENST00000679355.1:-496 ENST00000681045.1:-496 ENST00000681424.1:-496 ENST00000681675.1:-496 ENST00000681544.1:-496 ENST00000680272.1:-496 |
TATA-Box annotation
| Distance to TSS: | 492 |
|---|---|
| Nearest PromoterID: | NM_005347 |
| Entrez ID: | 3309 |
| Nearest Unigene: | Hs.743241 |
| Nearest Refseq: | NM_005347 |
| Nearest Ensembl: | ENSG00000044574 |
| Gene Name: | heat shock protein family A (Hsp70) member 5 |
| Gene Alias: | BIP|GRP78|HEL-S-89n|MIF2 |
| Gene Description: | heat shock protein family A (Hsp70) member 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
