Difference between revisions of "TSS:Hg 102503.1"
From referenceTSS
| Line 4: | Line 4: | ||
|SIN1b= | |SIN1b= | ||
|SIN1g= | |SIN1g= | ||
| − | |all_trans=ENST00000420643.5 | + | |all_trans=ENST00000420643.5:-51 AK316149:-72 ENST00000473837.5:-95 AK309507:-95 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-51 | |distance=-51 | ||
| − | |distance_to_tss= | + | |distance_to_tss=56850 |
|end=125650366 | |end=125650366 | ||
|end_of_center_position=125650358 | |end_of_center_position=125650358 | ||
|entrez_id=79109 | |entrez_id=79109 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| − | |gene_alias=JC310 | + | |gene_alias=JC310{{!}}MIP1{{!}}SIN1{{!}}SIN1b{{!}}SIN1g |
| − | |gene_description= | + | |gene_description=MAPK associated protein 1 |
|gene_id=79109 | |gene_id=79109 | ||
| − | |gene_name= | + | |gene_name=MAPK associated protein 1 |
|gene_source=HGNC:18752 | |gene_source=HGNC:18752 | ||
|gene_symbol=MAPKAP1 | |gene_symbol=MAPKAP1 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_024117 | |nearest_refseq=NM_024117 | ||
|nearest_unigene=Hs.495138 | |nearest_unigene=Hs.495138 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=125650349 | |start=125650349 | ||
|start_of_center_position=125650357 | |start_of_center_position=125650357 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=51(GGATTTAAATGG,-,0.00) |
| − | |transcript_name=ENST00000420643.5 | + | |transcript_name=ENST00000420643.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102503.1 | |tss_id=hg_102503.1 | ||
Revision as of 17:05, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 125650357 |
|---|---|
| End of the center position in the TSS region: | 125650358 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000420643.5 |
|---|---|
| Distance: | -51 |
| Num_trans: | 4 |
| All_trans: | ENST00000420643.5:-51 AK316149:-72 ENST00000473837.5:-95 AK309507:-95 |
TATA-Box annotation
| Distance to TSS: | 56850 |
|---|---|
| Nearest PromoterID: | NM_001006617 |
| Entrez ID: | 79109 |
| Nearest Unigene: | Hs.495138 |
| Nearest Refseq: | NM_024117 |
| Nearest Ensembl: | ENSG00000119487 |
| Gene Name: | MAPK associated protein 1 |
| Gene Alias: | JC310|MIP1|SIN1|SIN1b|SIN1g |
| Gene Description: | MAPK associated protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 51(GGATTTAAATGG,-,0.00) |
