Difference between revisions of "TSS:Hg 102516.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-61963 |entrez_id=641373 |gc_percent=0.412935 |gene_alias=NCRNA00194 |gene_description="non-protein coding RNA, repressor of NF...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=NA | ||
|distance_to_tss=-61963 | |distance_to_tss=-61963 | ||
| + | |end=126472468 | ||
| + | |end_of_center_position=126472468 | ||
|entrez_id=641373 | |entrez_id=641373 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
|gene_alias=NCRNA00194 | |gene_alias=NCRNA00194 | ||
| − | |gene_description= | + | |gene_description=non-coding repressor of NFAT |
|gene_name=NRON | |gene_name=NRON | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_045006 | |nearest_refseq=NR_045006 | ||
|nearest_unigene=Hs.742606 | |nearest_unigene=Hs.742606 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=126472466 | ||
| + | |start_of_center_position=126472467 | ||
| + | |strand=- | ||
| + | |tata_box=-48(CTATTTTAAAGG,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_102516.1 | |tss_id=hg_102516.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:05, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 126472467 |
|---|---|
| End of the center position in the TSS region: | 126472468 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -61963 |
|---|---|
| Nearest PromoterID: | NR_045006 |
| Entrez ID: | 641373 |
| Nearest Unigene: | Hs.742606 |
| Nearest Refseq: | NR_045006 |
| Nearest Ensembl: | |
| Gene Name: | NRON |
| Gene Alias: | NCRNA00194 |
| Gene Description: | non-coding repressor of NFAT |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -48(CTATTTTAAAGG,-,0.00) |
