Difference between revisions of "TSS:Hg 102520.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |NPS1= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=NA | ||
|distance_to_tss=-80374 | |distance_to_tss=-80374 | ||
| + | |end=126534074 | ||
| + | |end_of_center_position=126534070 | ||
|entrez_id=4010 | |entrez_id=4010 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=LMX1.2 | + | |gene_alias=LMX1.2{{!}}NPS1 |
|gene_description=LIM homeobox transcription factor 1 beta | |gene_description=LIM homeobox transcription factor 1 beta | ||
|gene_name=LMX1B | |gene_name=LMX1B | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000136944 | |nearest_ensembl=ENSG00000136944 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001174146 |
|nearest_refseq=NM_002316 | |nearest_refseq=NM_002316 | ||
|nearest_unigene=Hs.129133 | |nearest_unigene=Hs.129133 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=126534064 | ||
| + | |start_of_center_position=126534069 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_102520.1 | |tss_id=hg_102520.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:05, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 126534069 |
|---|---|
| End of the center position in the TSS region: | 126534070 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -80374 |
|---|---|
| Nearest PromoterID: | NM_001174146 |
| Entrez ID: | 4010 |
| Nearest Unigene: | Hs.129133 |
| Nearest Refseq: | NM_002316 |
| Nearest Ensembl: | ENSG00000136944 |
| Gene Name: | LMX1B |
| Gene Alias: | LMX1.2|NPS1 |
| Gene Description: | LIM homeobox transcription factor 1 beta |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
