Difference between revisions of "TSS:Hg 102533.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|HARP= | |HARP= | ||
| − | |all_trans=AK307175:0 BC012368:8 ENST00000373417.1 | + | |all_trans=AK307175:0 BC012368:8 ENST00000373425.8:11 NM_012098:11 ENST00000373417.1:12 AK074726:12 AK312876:-26 LF346892:57 MA582469:57 AY358274:-126 LF205657:-148 MA441234:-148 LF346893:190 MA582470:190 LP896558:-225 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-17 |
|end=127122658 | |end=127122658 | ||
|end_of_center_position=127122652 | |end_of_center_position=127122652 | ||
|entrez_id=23452 | |entrez_id=23452 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=ARP2 | + | |gene_alias=ARP2{{!}}HARP |
|gene_description=angiopoietin like 2 | |gene_description=angiopoietin like 2 | ||
|gene_id=23452 | |gene_id=23452 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_012098 | |nearest_refseq=NM_012098 | ||
|nearest_unigene=Hs.653262 | |nearest_unigene=Hs.653262 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=127122645 | |start=127122645 | ||
Revision as of 17:06, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 127122651 |
|---|---|
| End of the center position in the TSS region: | 127122652 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK307175 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | AK307175:0 BC012368:8 ENST00000373425.8:11 NM_012098:11 ENST00000373417.1:12 AK074726:12 AK312876:-26 LF346892:57 MA582469:57 AY358274:-126 LF205657:-148 MA441234:-148 LF346893:190 MA582470:190 LP896558:-225 |
TATA-Box annotation
| Distance to TSS: | -17 |
|---|---|
| Nearest PromoterID: | NM_012098 |
| Entrez ID: | 23452 |
| Nearest Unigene: | Hs.653262 |
| Nearest Refseq: | NM_012098 |
| Nearest Ensembl: | ENSG00000136859 |
| Gene Name: | angiopoietin like 2 |
| Gene Alias: | ARP2|HARP |
| Gene Description: | angiopoietin like 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
