Difference between revisions of "TSS:Hg 102535.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|HARP= | |HARP= | ||
| − | |all_trans=AK312876:32 | + | |all_trans=AK312876:32 AY358274:-56 AK307175:63 LF205657:-78 MA441234:-78 BC012368:78 ENST00000373425.8:81 NM_012098:81 ENST00000373417.1:82 AK074726:82 LF346892:127 MA582469:127 LP896558:-155 LF346893:260 MA582470:260 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=32 | |distance=32 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-87 |
|end=127122728 | |end=127122728 | ||
|end_of_center_position=127122722 | |end_of_center_position=127122722 | ||
|entrez_id=23452 | |entrez_id=23452 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=ARP2 | + | |gene_alias=ARP2{{!}}HARP |
|gene_description=angiopoietin like 2 | |gene_description=angiopoietin like 2 | ||
|gene_id=23452 | |gene_id=23452 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_012098 | |nearest_refseq=NM_012098 | ||
|nearest_unigene=Hs.653262 | |nearest_unigene=Hs.653262 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=127122715 | |start=127122715 | ||
Revision as of 17:06, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 127122721 |
|---|---|
| End of the center position in the TSS region: | 127122722 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK312876 |
|---|---|
| Distance: | 32 |
| Num_trans: | 15 |
| All_trans: | AK312876:32 AY358274:-56 AK307175:63 LF205657:-78 MA441234:-78 BC012368:78 ENST00000373425.8:81 NM_012098:81 ENST00000373417.1:82 AK074726:82 LF346892:127 MA582469:127 LP896558:-155 LF346893:260 MA582470:260 |
TATA-Box annotation
| Distance to TSS: | -87 |
|---|---|
| Nearest PromoterID: | NM_012098 |
| Entrez ID: | 23452 |
| Nearest Unigene: | Hs.653262 |
| Nearest Refseq: | NM_012098 |
| Nearest Ensembl: | ENSG00000136859 |
| Gene Name: | angiopoietin like 2 |
| Gene Alias: | ARP2|HARP |
| Gene Description: | angiopoietin like 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
