Difference between revisions of "TSS:Hg 102540.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000361436.10:24 NM_000976:24 ENST00000497825.5:25 ENST00000497322.1:25 AK026526:25 AK057602:25 BC105603:25 D28443:25 AF037643:28 BC008230:36 BC050644:45 L06505:45 BC094831:50 ENST00000536368.1:57 BC059950:57 KJ901711:112 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| − | |distance= | + | |distance=24 |
| − | |distance_to_tss=- | + | |distance_to_tss=-28 |
|end=127451438 | |end=127451438 | ||
|end_of_center_position=127451434 | |end_of_center_position=127451434 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_000976 | |nearest_refseq=NM_000976 | ||
|nearest_unigene=Hs.408054 | |nearest_unigene=Hs.408054 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=127451429 | |start=127451429 | ||
|start_of_center_position=127451433 | |start_of_center_position=127451433 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_000976 | + | |transcript_name=ENST00000361436.10 NM_000976 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102540.1 | |tss_id=hg_102540.1 | ||
Revision as of 17:06, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 127451433 |
|---|---|
| End of the center position in the TSS region: | 127451434 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000361436.10 NM_000976 |
|---|---|
| Distance: | 24 |
| Num_trans: | 16 |
| All_trans: | ENST00000361436.10:24 NM_000976:24 ENST00000497825.5:25 ENST00000497322.1:25 AK026526:25 AK057602:25 BC105603:25 D28443:25 AF037643:28 BC008230:36 BC050644:45 L06505:45 BC094831:50 ENST00000536368.1:57 BC059950:57 KJ901711:112 |
TATA-Box annotation
| Distance to TSS: | -28 |
|---|---|
| Nearest PromoterID: | NM_000976 |
| Entrez ID: | 6136 |
| Nearest Unigene: | Hs.408054 |
| Nearest Refseq: | NM_000976 |
| Nearest Ensembl: | ENSG00000197958 |
| Gene Name: | ribosomal protein L12 |
| Gene Alias: | L12 |
| Gene Description: | ribosomal protein L12 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
