Difference between revisions of "TSS:Hg 102550.1"
From referenceTSS
| Line 3: | Line 3: | ||
|MINERVA= | |MINERVA= | ||
|OC58= | |OC58= | ||
| − | |all_trans=ENST00000373312. | + | |all_trans=ENST00000373312.4:0 ENST00000484348.2:0 NM_022833:0 BC110345:0 AF192911:-3 ENST00000468379.1:66 BC067366:74 LF205653:-96 MA441230:-96 ENST00000478917.1:134 AB210016:164 LF346852:259 MA582429:259 |
|bA356B19.6= | |bA356B19.6= | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=7 |
|end=127569114 | |end=127569114 | ||
|end_of_center_position=127569067 | |end_of_center_position=127569067 | ||
|entrez_id=64855 | |entrez_id=64855 | ||
|gc_percent=0.840796 | |gc_percent=0.840796 | ||
| − | |gene_alias=C9orf88 | + | |gene_alias=C9orf88{{!}}FAM129B{{!}}MEG-3{{!}}MINERVA{{!}}OC58{{!}}bA356B19.6 |
| − | |gene_description= | + | |gene_description=niban apoptosis regulator 2 |
|gene_id=64855 | |gene_id=64855 | ||
| − | |gene_name= | + | |gene_name=niban apoptosis regulator 2 |
|gene_source=HGNC:25282 | |gene_source=HGNC:25282 | ||
| − | |gene_symbol= | + | |gene_symbol=NIBAN2 |
|gene_synonyms=DKFZP434H0820 FLJ13518 FLJ22151 FLJ22298 MINERVA bA356B19.6 | |gene_synonyms=DKFZP434H0820 FLJ13518 FLJ22151 FLJ22298 MINERVA bA356B19.6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 31: | Line 31: | ||
|start_of_center_position=127569066 | |start_of_center_position=127569066 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000373312. | + | |transcript_name=ENST00000373312.4 ENST00000484348.2 NM_022833 BC110345 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102550.1 | |tss_id=hg_102550.1 | ||
Revision as of 17:06, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 127569066 |
|---|---|
| End of the center position in the TSS region: | 127569067 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000373312.4 ENST00000484348.2 NM_022833 BC110345 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000373312.4:0 ENST00000484348.2:0 NM_022833:0 BC110345:0 AF192911:-3 ENST00000468379.1:66 BC067366:74 LF205653:-96 MA441230:-96 ENST00000478917.1:134 AB210016:164 LF346852:259 MA582429:259 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_022833 |
| Entrez ID: | 64855 |
| Nearest Unigene: | Hs.522401 |
| Nearest Refseq: | NM_022833 |
| Nearest Ensembl: | ENSG00000136830 |
| Gene Name: | niban apoptosis regulator 2 |
| Gene Alias: | C9orf88|FAM129B|MEG-3|MINERVA|OC58|bA356B19.6 |
| Gene Description: | niban apoptosis regulator 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.840796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
