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Difference between revisions of "TSS:Hg 102554.1"

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Line 3: Line 3:
 
|MINERVA=
 
|MINERVA=
 
|OC58=
 
|OC58=
|all_trans=NM_001035534:49 ENST00000373314.7:67 uc004bri.5:67 AF151783:67
+
|all_trans=NM_001035534:25 ENST00000373314.7:67 AF151783:67
 
|bA356B19.6=
 
|bA356B19.6=
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.02
 
|cpg_percent=0.02
|distance=49
+
|distance=25
|distance_to_tss=-50
+
|distance_to_tss=-26
 
|end=127579058
 
|end=127579058
 
|end_of_center_position=127579057
 
|end_of_center_position=127579057
 
|entrez_id=64855
 
|entrez_id=64855
 
|gc_percent=0.606965
 
|gc_percent=0.606965
|gene_alias=C9orf88
+
|gene_alias=C9orf88{{!}}FAM129B{{!}}MEG-3{{!}}MINERVA{{!}}OC58{{!}}bA356B19.6
|gene_description=family with sequence similarity 129 member B
+
|gene_description=niban apoptosis regulator 2
 
|gene_id=64855
 
|gene_id=64855
|gene_name=family with sequence similarity 129 member B
+
|gene_name=niban apoptosis regulator 2
 
|gene_source=HGNC:25282
 
|gene_source=HGNC:25282
|gene_symbol=FAM129B
+
|gene_symbol=NIBAN2
 
|gene_synonyms=DKFZP434H0820 FLJ13518 FLJ22151 FLJ22298 MINERVA bA356B19.6
 
|gene_synonyms=DKFZP434H0820 FLJ13518 FLJ22151 FLJ22298 MINERVA bA356B19.6
 
|gene_type=protein-coding
 
|gene_type=protein-coding
Line 26: Line 26:
 
|nearest_refseq=NM_022833
 
|nearest_refseq=NM_022833
 
|nearest_unigene=Hs.522401
 
|nearest_unigene=Hs.522401
|num_trans=4
+
|num_trans=3
 
|species=human
 
|species=human
 
|start=127579055
 
|start=127579055

Revision as of 17:06, 15 June 2021

Basic information about the TSS


TSS ID:hg_102554.1
Species:human
Chr:chr9
TSS Classification:yes
Start:127579055
End:127579058
Strand:-
TSS Score:1
Start of the center position in the TSS region:127579056
End of the center position in the TSS region:127579057



Gene and protein annotation


Transcript_name:NM_001035534
Distance:25
GeneID:64855
HGNC/MGI_ID:HGNC:25282
UniProt_ID:Q96TA1
Gene_name:niban apoptosis regulator 2
Gene_symbol:NIBAN2
Gene_synonyms:DKFZP434H0820 FLJ13518 FLJ22151 FLJ22298 MINERVA bA356B19.6
Gene_source:HGNC:25282



Transcript annotation


Transcript_name:NM_001035534
Distance:25
Num_trans:3
All_trans:NM_001035534:25 ENST00000373314.7:67 AF151783:67



TATA-Box annotation


Distance to TSS:-26
Nearest PromoterID:NM_001035534
Entrez ID:64855
Nearest Unigene:Hs.522401
Nearest Refseq:NM_022833
Nearest Ensembl:ENSG00000136830
Gene Name:niban apoptosis regulator 2
Gene Alias:C9orf88|FAM129B|MEG-3|MINERVA|OC58|bA356B19.6
Gene Description:niban apoptosis regulator 2
Gene Type:protein-coding
CpG%:0.02
GC%:0.606965
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):