Difference between revisions of "TSS:Hg 102557.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=-109 |entrez_id=100500872 |gc_percent=0.552239 |gene_alias=mir-3911 |gene_description=microRNA 3911 |gene_name=MIR3911 |gene_typ...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=CU677424:9 ENST00000624141.1:25 LF346848:31 MA582425:31 LG052505:70 FR772812:81 LF137985:81 LF160642:81 LF162950:81 LF953702:81 LG006047:81 LG053743:81 LG240982:81 LP951927:81 LQ070656:81 LQ970693:81 LV471067:81 LX154557:81 MA644157:81 MA732041:81 MA801210:81 MP129757:81 MP162680:81 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| + | |distance=9 | ||
|distance_to_tss=-109 | |distance_to_tss=-109 | ||
| + | |end=127690944 | ||
| + | |end_of_center_position=127690905 | ||
|entrez_id=100500872 | |entrez_id=100500872 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| Line 8: | Line 13: | ||
|gene_name=MIR3911 | |gene_name=MIR3911 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000283874 |
|nearest_promoter_id=NR_037473 | |nearest_promoter_id=NR_037473 | ||
|nearest_refseq=NR_037473 | |nearest_refseq=NR_037473 | ||
|nearest_unigene= | |nearest_unigene= | ||
| + | |num_trans=23 | ||
| + | |species=human | ||
| + | |start=127690864 | ||
| + | |start_of_center_position=127690904 | ||
| + | |strand=- | ||
| + | |transcript_name=CU677424 | ||
| + | |tss_classification=no | ||
|tss_id=hg_102557.1 | |tss_id=hg_102557.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:06, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 127690904 |
|---|---|
| End of the center position in the TSS region: | 127690905 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | CU677424 |
|---|---|
| Distance: | 9 |
| Num_trans: | 23 |
| All_trans: | CU677424:9 ENST00000624141.1:25 LF346848:31 MA582425:31 LG052505:70 FR772812:81 LF137985:81 LF160642:81 LF162950:81 LF953702:81 LG006047:81 LG053743:81 LG240982:81 LP951927:81 LQ070656:81 LQ970693:81 LV471067:81 LX154557:81 MA644157:81 MA732041:81 MA801210:81 MP129757:81 MP162680:81 |
TATA-Box annotation
| Distance to TSS: | -109 |
|---|---|
| Nearest PromoterID: | NR_037473 |
| Entrez ID: | 100500872 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_037473 |
| Nearest Ensembl: | ENSG00000283874 |
| Gene Name: | MIR3911 |
| Gene Alias: | mir-3911 |
| Gene Description: | microRNA 3911 |
| Gene Type: | ncRNA |
| CpG%: | 0.05 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
