Difference between revisions of "TSS:Hg 10256.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AB060688:-16 | + | |all_trans=AB060688:-16 BC007240:-66 LF357428:95 MA593005:95 AK304348:-101 AK312550:-106 ENST00000377223.6:-128 NM_001316975:-128 NM_001316973:-128 NM_001316974:-128 NM_001316976:-128 NM_032368:-128 ENST00000377213.1:-144 LF357427:-195 MA593004:-195 LF357429:203 MA593006:203 LF357430:278 MA593007:278 LF357431:432 MA593008:432 ENST00000400903.6:489 BC063443:489 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance=-16 | |distance=-16 | ||
| − | |distance_to_tss= | + | |distance_to_tss=131 |
|end=9943263 | |end=9943263 | ||
|end_of_center_position=9943260 | |end_of_center_position=9943260 | ||
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|hgnc_mgi_id=HGNC:17497 | |hgnc_mgi_id=HGNC:17497 | ||
|nearest_ensembl=ENSG00000162441 | |nearest_ensembl=ENSG00000162441 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_032368 |
|nearest_refseq=NM_032368 | |nearest_refseq=NM_032368 | ||
|nearest_unigene=Hs.327252 | |nearest_unigene=Hs.327252 | ||
| − | |num_trans= | + | |num_trans=23 |
|species=human | |species=human | ||
|start=9943256 | |start=9943256 | ||
Revision as of 17:06, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 9943259 |
|---|---|
| End of the center position in the TSS region: | 9943260 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB060688 |
|---|---|
| Distance: | -16 |
| Num_trans: | 23 |
| All_trans: | AB060688:-16 BC007240:-66 LF357428:95 MA593005:95 AK304348:-101 AK312550:-106 ENST00000377223.6:-128 NM_001316975:-128 NM_001316973:-128 NM_001316974:-128 NM_001316976:-128 NM_032368:-128 ENST00000377213.1:-144 LF357427:-195 MA593004:-195 LF357429:203 MA593006:203 LF357430:278 MA593007:278 LF357431:432 MA593008:432 ENST00000400903.6:489 BC063443:489 |
TATA-Box annotation
| Distance to TSS: | 131 |
|---|---|
| Nearest PromoterID: | NM_032368 |
| Entrez ID: | 84328 |
| Nearest Unigene: | Hs.327252 |
| Nearest Refseq: | NM_032368 |
| Nearest Ensembl: | ENSG00000162441 |
| Gene Name: | leucine zipper and CTNNBIP1 domain containing |
| Gene Alias: | - |
| Gene Description: | leucine zipper and CTNNBIP1 domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
