Difference between revisions of "TSS:Hg 102560.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000419060.5 | + | |all_trans=ENST00000419060.5:0 AK090922:0 ENST00000429848.1:33 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=8796 |
|end=127724885 | |end=127724885 | ||
|end_of_center_position=127724875 | |end_of_center_position=127724875 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:27039 | |hgnc_mgi_id=HGNC:27039 | ||
|nearest_ensembl=ENSG00000167094 | |nearest_ensembl=ENSG00000167094 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001317037 |
|nearest_refseq=NM_144965 | |nearest_refseq=NM_144965 | ||
|nearest_unigene=Hs.642748 | |nearest_unigene=Hs.642748 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=127724864 | |start=127724864 | ||
|start_of_center_position=127724874 | |start_of_center_position=127724874 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000419060.5 | + | |transcript_name=ENST00000419060.5 AK090922 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102560.1 | |tss_id=hg_102560.1 | ||
Revision as of 17:06, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 127724874 |
|---|---|
| End of the center position in the TSS region: | 127724875 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000419060.5 AK090922 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENST00000419060.5:0 AK090922:0 ENST00000429848.1:33 |
TATA-Box annotation
| Distance to TSS: | 8796 |
|---|---|
| Nearest PromoterID: | NM_001317037 |
| Entrez ID: | 158248 |
| Nearest Unigene: | Hs.642748 |
| Nearest Refseq: | NM_144965 |
| Nearest Ensembl: | ENSG00000167094 |
| Gene Name: | peptidyl-tRNA hydrolase 1 homolog |
| Gene Alias: | - |
| Gene Description: | tetratricopeptide repeat domain 16 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
