Difference between revisions of "TSS:Hg 10257.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AB060688:12 | + | |all_trans=AB060688:12 BC007240:-25 AK304348:-60 AK312550:-65 ENST00000377223.6:-87 NM_001316975:-87 NM_001316973:-87 NM_001316974:-87 NM_001316976:-87 NM_032368:-87 ENST00000377213.1:-103 LF357428:129 MA593005:129 LF357427:-154 MA593004:-154 LF357429:237 MA593006:237 LF357430:312 MA593007:312 LF357431:466 MA593008:466 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
|distance=12 | |distance=12 | ||
| − | |distance_to_tss= | + | |distance_to_tss=94 |
|end=9943304 | |end=9943304 | ||
|end_of_center_position=9943298 | |end_of_center_position=9943298 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:17497 | |hgnc_mgi_id=HGNC:17497 | ||
|nearest_ensembl=ENSG00000162441 | |nearest_ensembl=ENSG00000162441 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_032368 |
|nearest_refseq=NM_032368 | |nearest_refseq=NM_032368 | ||
|nearest_unigene=Hs.327252 | |nearest_unigene=Hs.327252 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
|start=9943290 | |start=9943290 | ||
Revision as of 17:06, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 9943297 |
|---|---|
| End of the center position in the TSS region: | 9943298 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB060688 |
|---|---|
| Distance: | 12 |
| Num_trans: | 21 |
| All_trans: | AB060688:12 BC007240:-25 AK304348:-60 AK312550:-65 ENST00000377223.6:-87 NM_001316975:-87 NM_001316973:-87 NM_001316974:-87 NM_001316976:-87 NM_032368:-87 ENST00000377213.1:-103 LF357428:129 MA593005:129 LF357427:-154 MA593004:-154 LF357429:237 MA593006:237 LF357430:312 MA593007:312 LF357431:466 MA593008:466 |
TATA-Box annotation
| Distance to TSS: | 94 |
|---|---|
| Nearest PromoterID: | NM_032368 |
| Entrez ID: | 84328 |
| Nearest Unigene: | Hs.327252 |
| Nearest Refseq: | NM_032368 |
| Nearest Ensembl: | ENSG00000162441 |
| Gene Name: | leucine zipper and CTNNBIP1 domain containing |
| Gene Alias: | - |
| Gene Description: | leucine zipper and CTNNBIP1 domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
