Difference between revisions of "TSS:Hg 102612.1"
From referenceTSS
| Line 2: | Line 2: | ||
|SIAT7F= | |SIAT7F= | ||
|ST6GALNACVI= | |ST6GALNACVI= | ||
| − | |all_trans=ENST00000542456.5:-38 ENST00000373141.5:-38 NM_001287001:-38 NM_001287003 | + | |all_trans=ENST00000542456.5:-38 ENST00000373141.5:-38 NM_001287001:-38 NM_001287003:-38 AK057100:-38 AK300534:59 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 11: | Line 11: | ||
|entrez_id=30815 | |entrez_id=30815 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=SIAT7-F | + | |gene_alias=SIAT7-F{{!}}SIAT7F{{!}}ST6GALNACVI |
| − | |gene_description= | + | |gene_description=ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 |
|gene_id=30815 | |gene_id=30815 | ||
| − | |gene_name= | + | |gene_name=ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 |
|gene_source=HGNC:23364 | |gene_source=HGNC:23364 | ||
|gene_symbol=ST6GALNAC6 | |gene_symbol=ST6GALNAC6 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:23364 | |hgnc_mgi_id=HGNC:23364 | ||
|nearest_ensembl=ENSG00000160408 | |nearest_ensembl=ENSG00000160408 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001287001 |
|nearest_refseq=NM_013443 | |nearest_refseq=NM_013443 | ||
|nearest_unigene=Hs.109672 | |nearest_unigene=Hs.109672 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=127897348 | |start=127897348 | ||
|start_of_center_position=127897359 | |start_of_center_position=127897359 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000542456.5 ENST00000373141.5 NM_001287001 NM_001287003 | + | |transcript_name=ENST00000542456.5 ENST00000373141.5 NM_001287001 NM_001287003 AK057100 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102612.1 | |tss_id=hg_102612.1 | ||
Revision as of 17:08, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 127897359 |
|---|---|
| End of the center position in the TSS region: | 127897360 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000542456.5 ENST00000373141.5 NM_001287001 NM_001287003 AK057100 |
|---|---|
| Distance: | -38 |
| Num_trans: | 6 |
| All_trans: | ENST00000542456.5:-38 ENST00000373141.5:-38 NM_001287001:-38 NM_001287003:-38 AK057100:-38 AK300534:59 |
TATA-Box annotation
| Distance to TSS: | 49 |
|---|---|
| Nearest PromoterID: | NM_001287001 |
| Entrez ID: | 30815 |
| Nearest Unigene: | Hs.109672 |
| Nearest Refseq: | NM_013443 |
| Nearest Ensembl: | ENSG00000160408 |
| Gene Name: | ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 |
| Gene Alias: | SIAT7-F|SIAT7F|ST6GALNACVI |
| Gene Description: | ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
