Difference between revisions of "TSS:Hg 102615.1"
From referenceTSS
| Line 2: | Line 2: | ||
|SIAT7F= | |SIAT7F= | ||
|ST6GALNACVI= | |ST6GALNACVI= | ||
| − | |all_trans=ENST00000373146.5:0 ENST00000373142.5:0 ENST00000373144.7 | + | |all_trans=ENST00000373146.5:0 ENST00000373142.5:0 ENST00000373144.7:0 NM_013443:0 NM_001287000:0 NM_001286999:0 BC036102:24 ENST00000480417.5:32 ENST00000494541.5:34 AK023900:40 ENST00000463086.5:45 BC007802:46 BC016299:46 GQ900923:46 ENST00000646171.1:47 ENST00000645007.1:57 ENST00000291839.10:64 BC006564:73 ENST00000478319.5:103 AK226174:109 ENST00000481355.5:222 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| Line 11: | Line 11: | ||
|entrez_id=30815 | |entrez_id=30815 | ||
|gc_percent=0.845771 | |gc_percent=0.845771 | ||
| − | |gene_alias=SIAT7-F | + | |gene_alias=SIAT7-F{{!}}SIAT7F{{!}}ST6GALNACVI |
| − | |gene_description= | + | |gene_description=ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 |
|gene_id=30815 | |gene_id=30815 | ||
| − | |gene_name= | + | |gene_name=ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 |
|gene_source=HGNC:23364 | |gene_source=HGNC:23364 | ||
|gene_symbol=ST6GALNAC6 | |gene_symbol=ST6GALNAC6 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_013443 | |nearest_refseq=NM_013443 | ||
|nearest_unigene=Hs.109672 | |nearest_unigene=Hs.109672 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
|start=127899637 | |start=127899637 | ||
|start_of_center_position=127899654 | |start_of_center_position=127899654 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000373146.5 ENST00000373142.5 ENST00000373144.7 | + | |transcript_name=ENST00000373146.5 ENST00000373142.5 ENST00000373144.7 NM_013443 NM_001287000 NM_001286999 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102615.1 | |tss_id=hg_102615.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A024R8C6 Q969X2 | + | |uniprot_id=A0A024R8C6 A0A0S2Z5G9 Q969X2 |
}} | }} | ||
Revision as of 17:08, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 127899654 |
|---|---|
| End of the center position in the TSS region: | 127899655 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000373146.5 ENST00000373142.5 ENST00000373144.7 NM_013443 NM_001287000 NM_001286999 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENST00000373146.5:0 ENST00000373142.5:0 ENST00000373144.7:0 NM_013443:0 NM_001287000:0 NM_001286999:0 BC036102:24 ENST00000480417.5:32 ENST00000494541.5:34 AK023900:40 ENST00000463086.5:45 BC007802:46 BC016299:46 GQ900923:46 ENST00000646171.1:47 ENST00000645007.1:57 ENST00000291839.10:64 BC006564:73 ENST00000478319.5:103 AK226174:109 ENST00000481355.5:222 |
TATA-Box annotation
| Distance to TSS: | -6 |
|---|---|
| Nearest PromoterID: | NM_001286999 |
| Entrez ID: | 30815 |
| Nearest Unigene: | Hs.109672 |
| Nearest Refseq: | NM_013443 |
| Nearest Ensembl: | ENSG00000160408 |
| Gene Name: | ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 |
| Gene Alias: | SIAT7-F|SIAT7F|ST6GALNACVI |
| Gene Description: | ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.845771 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
