Difference between revisions of "TSS:Hg 102620.1"
From referenceTSS
| Line 6: | Line 6: | ||
|ST6GALNACIV= | |ST6GALNACIV= | ||
|ST6GalNAc= | |ST6GalNAc= | ||
| − | |all_trans=ENST00000335791. | + | |all_trans=ENST00000335791.10:0 ENST00000467674.5:0 ENST00000361444.3:0 ENST00000479747.1:0 NM_175039:0 NM_175040:0 AK292049:0 AK000600:0 AJ271734:0 BC036705:47 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| Line 15: | Line 15: | ||
|entrez_id=27090 | |entrez_id=27090 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| − | |gene_alias=IV | + | |gene_alias=IV{{!}}SIAT3-C{{!}}SIAT3C{{!}}SIAT7-D{{!}}SIAT7D{{!}}ST6GALNACIV{{!}}ST6GalNAc |
| − | |gene_description= | + | |gene_description=ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 |
|gene_id=27090 | |gene_id=27090 | ||
| − | |gene_name= | + | |gene_name=ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 |
|gene_source=HGNC:17846 | |gene_source=HGNC:17846 | ||
|gene_symbol=ST6GALNAC4 | |gene_symbol=ST6GALNAC4 | ||
| Line 25: | Line 25: | ||
|hgnc_mgi_id=HGNC:17846 | |hgnc_mgi_id=HGNC:17846 | ||
|nearest_ensembl=ENSG00000136840 | |nearest_ensembl=ENSG00000136840 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_175040 |
|nearest_refseq=NM_014403 | |nearest_refseq=NM_014403 | ||
|nearest_unigene=Hs.3972 | |nearest_unigene=Hs.3972 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=127916978 | |start=127916978 | ||
|start_of_center_position=127917017 | |start_of_center_position=127917017 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000335791. | + | |transcript_name=ENST00000335791.10 ENST00000467674.5 ENST00000361444.3 ENST00000479747.1 NM_175039 NM_175040 AK292049 AK000600 AJ271734 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102620.1 | |tss_id=hg_102620.1 | ||
Revision as of 17:08, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 127917017 |
|---|---|
| End of the center position in the TSS region: | 127917018 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000335791.10 ENST00000467674.5 ENST00000361444.3 ENST00000479747.1 NM_175039 NM_175040 AK292049 AK000600 AJ271734 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000335791.10:0 ENST00000467674.5:0 ENST00000361444.3:0 ENST00000479747.1:0 NM_175039:0 NM_175040:0 AK292049:0 AK000600:0 AJ271734:0 BC036705:47 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NM_175040 |
| Entrez ID: | 27090 |
| Nearest Unigene: | Hs.3972 |
| Nearest Refseq: | NM_014403 |
| Nearest Ensembl: | ENSG00000136840 |
| Gene Name: | ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 |
| Gene Alias: | IV|SIAT3-C|SIAT3C|SIAT7-D|SIAT7D|ST6GALNACIV|ST6GalNAc |
| Gene Description: | ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
