Difference between revisions of "TSS:Hg 102629.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000495270.1:0 ENST00000470181.1:0 ENST00000373110.4:0 | + | |all_trans=ENST00000495270.1:0 ENST00000314392.13:0 ENST00000470181.1:0 ENST00000373110.4:0 NM_003863:0 NM_001378437:0 NR_165631:0 NR_165632:0 NM_001378436:0 BC015374:0 BC107863:0 AF061729:0 AB013361:0 AK312121:0 ENST00000473360.1:23 AB451329:278 AB451473:278 CR542134:278 KJ901915:278 BC048256:279 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
|gene_alias=CDG1U | |gene_alias=CDG1U | ||
| − | |gene_description= | + | |gene_description=dolichyl-phosphate mannosyltransferase subunit 2, regulatory |
|gene_id=8818 | |gene_id=8818 | ||
| − | |gene_name= | + | |gene_name=dolichyl-phosphate mannosyltransferase subunit 2, regulatory |
|gene_source=HGNC:3006 | |gene_source=HGNC:3006 | ||
|gene_symbol=DPM2 | |gene_symbol=DPM2 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_003863 | |nearest_refseq=NM_003863 | ||
|nearest_unigene=Hs.108973 | |nearest_unigene=Hs.108973 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=127937801 | |start=127937801 | ||
|start_of_center_position=127937841 | |start_of_center_position=127937841 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000495270.1 ENST00000470181.1 ENST00000373110.4 | + | |transcript_name=ENST00000495270.1 ENST00000314392.13 ENST00000470181.1 ENST00000373110.4 NM_003863 NM_001378437 NR_165631 NR_165632 NM_001378436 BC015374 BC107863 AF061729 AB013361 AK312121 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102629.1 | |tss_id=hg_102629.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q5T9C7 | + | |uniprot_id=O94777 Q5T9C7 |
}} | }} | ||
Revision as of 17:08, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 127937841 |
|---|---|
| End of the center position in the TSS region: | 127937842 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000495270.1 ENST00000314392.13 ENST00000470181.1 ENST00000373110.4 NM_003863 NM_001378437 NR_165631 NR_165632 NM_001378436 BC015374 BC107863 AF061729 AB013361 AK312121 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000495270.1:0 ENST00000314392.13:0 ENST00000470181.1:0 ENST00000373110.4:0 NM_003863:0 NM_001378437:0 NR_165631:0 NR_165632:0 NM_001378436:0 BC015374:0 BC107863:0 AF061729:0 AB013361:0 AK312121:0 ENST00000473360.1:23 AB451329:278 AB451473:278 CR542134:278 KJ901915:278 BC048256:279 |
TATA-Box annotation
| Distance to TSS: | 643 |
|---|---|
| Nearest PromoterID: | NM_003863 |
| Entrez ID: | 8818 |
| Nearest Unigene: | Hs.108973 |
| Nearest Refseq: | NM_003863 |
| Nearest Ensembl: | ENSG00000136908 |
| Gene Name: | dolichyl-phosphate mannosyltransferase subunit 2, regulatory |
| Gene Alias: | CDG1U |
| Gene Description: | dolichyl-phosphate mannosyltransferase subunit 2, regulatory |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
