Difference between revisions of "TSS:Hg 10265.1"
From referenceTSS
| Line 8: | Line 8: | ||
|dJ734G22.1= | |dJ734G22.1= | ||
|distance=25 | |distance=25 | ||
| − | |distance_to_tss= | + | |distance_to_tss=158826 |
|end=10637820 | |end=10637820 | ||
|end_of_center_position=10637820 | |end_of_center_position=10637820 | ||
|entrez_id=54897 | |entrez_id=54897 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| − | |gene_alias=CAS11 | + | |gene_alias=CAS11{{!}}CST{{!}}SRG{{!}}ZNF693{{!}}dJ734G22.1 |
|gene_description=castor zinc finger 1 | |gene_description=castor zinc finger 1 | ||
|gene_id=54897 | |gene_id=54897 | ||
| Line 31: | Line 31: | ||
|start_of_center_position=10637819 | |start_of_center_position=10637819 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-26(GGCTTTATAGGG,-,0.00) |
|transcript_name=AK130996 | |transcript_name=AK130996 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 17:08, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 10637819 |
|---|---|
| End of the center position in the TSS region: | 10637820 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK130996 |
|---|---|
| Distance: | 25 |
| Num_trans: | 1 |
| All_trans: | AK130996:25 |
TATA-Box annotation
| Distance to TSS: | 158826 |
|---|---|
| Nearest PromoterID: | NM_001079843 |
| Entrez ID: | 54897 |
| Nearest Unigene: | Hs.439894 |
| Nearest Refseq: | NM_017766 |
| Nearest Ensembl: | ENSG00000130940 |
| Gene Name: | castor zinc finger 1 |
| Gene Alias: | CAS11|CST|SRG|ZNF693|dJ734G22.1 |
| Gene Description: | castor zinc finger 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -26(GGCTTTATAGGG,-,0.00) |
