Difference between revisions of "TSS:Hg 102662.1"
From referenceTSS
| Line 3: | Line 3: | ||
|GBF1= | |GBF1= | ||
|PGES2= | |PGES2= | ||
| − | |all_trans=ENST00000487063.5 | + | |all_trans=ENST00000487063.5:0 ENST00000485237.1:19 ENST00000617202.4:-39 NM_001256335:-39 BC011613:236 ENST00000476748.5:-246 AK301618:-246 ENST00000277462.9:-313 NM_198938:-313 AK057049:-313 ENST00000678916.1:398 ENST00000483625.6:398 ENST00000678174.1:401 ENST00000497109.6:401 ENST00000474124.6:401 ENST00000338961.11:404 ENST00000679345.1:404 NM_025072:404 AK024100:404 ENST00000677980.1:407 ENST00000677651.1:408 ENST00000676562.1:409 ENST00000449878.1:409 AK223520:409 ENST00000476655.6:412 KJ905547:415 DQ891904:415 DQ895090:415 AB463194:415 AM392565:415 ENST00000496594.5:416 BC009456:418 ENST00000485510.5:422 BC009397:436 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 12: | Line 12: | ||
|entrez_id=80142 | |entrez_id=80142 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=C9orf15 | + | |gene_alias=C9orf15{{!}}GBF-1{{!}}GBF1{{!}}PGES2{{!}}mPGES-2 |
|gene_description=prostaglandin E synthase 2 | |gene_description=prostaglandin E synthase 2 | ||
|gene_id=80142 | |gene_id=80142 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_025072 | |nearest_refseq=NM_025072 | ||
|nearest_unigene=Hs.495219 | |nearest_unigene=Hs.495219 | ||
| − | |num_trans= | + | |num_trans=34 |
|species=human | |species=human | ||
|start=128128132 | |start=128128132 | ||
|start_of_center_position=128128140 | |start_of_center_position=128128140 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000487063.5 | + | |transcript_name=ENST00000487063.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102662.1 | |tss_id=hg_102662.1 | ||
Revision as of 17:09, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 128128140 |
|---|---|
| End of the center position in the TSS region: | 128128141 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000487063.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 34 |
| All_trans: | ENST00000487063.5:0 ENST00000485237.1:19 ENST00000617202.4:-39 NM_001256335:-39 BC011613:236 ENST00000476748.5:-246 AK301618:-246 ENST00000277462.9:-313 NM_198938:-313 AK057049:-313 ENST00000678916.1:398 ENST00000483625.6:398 ENST00000678174.1:401 ENST00000497109.6:401 ENST00000474124.6:401 ENST00000338961.11:404 ENST00000679345.1:404 NM_025072:404 AK024100:404 ENST00000677980.1:407 ENST00000677651.1:408 ENST00000676562.1:409 ENST00000449878.1:409 AK223520:409 ENST00000476655.6:412 KJ905547:415 DQ891904:415 DQ895090:415 AB463194:415 AM392565:415 ENST00000496594.5:416 BC009456:418 ENST00000485510.5:422 BC009397:436 |
TATA-Box annotation
| Distance to TSS: | 47 |
|---|---|
| Nearest PromoterID: | NM_001256335 |
| Entrez ID: | 80142 |
| Nearest Unigene: | Hs.495219 |
| Nearest Refseq: | NM_025072 |
| Nearest Ensembl: | ENSG00000148334 |
| Gene Name: | prostaglandin E synthase 2 |
| Gene Alias: | C9orf15|GBF-1|GBF1|PGES2|mPGES-2 |
| Gene Description: | prostaglandin E synthase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
