Difference between revisions of "TSS:Hg 102663.1"
From referenceTSS
| Line 3: | Line 3: | ||
|GBF1= | |GBF1= | ||
|PGES2= | |PGES2= | ||
| − | |all_trans=ENST00000476748.5 | + | |all_trans=ENST00000476748.5:0 AK301618:0 ENST00000277462.9:-11 NM_198938:-11 AK057049:-11 ENST00000617202.4:196 NM_001256335:196 ENST00000487063.5:238 ENST00000485237.1:270 BC011613:487 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 12: | Line 12: | ||
|entrez_id=80142 | |entrez_id=80142 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=C9orf15 | + | |gene_alias=C9orf15{{!}}GBF-1{{!}}GBF1{{!}}PGES2{{!}}mPGES-2 |
|gene_description=prostaglandin E synthase 2 | |gene_description=prostaglandin E synthase 2 | ||
|gene_id=80142 | |gene_id=80142 | ||
| Line 23: | Line 23: | ||
|mPGES-2= | |mPGES-2= | ||
|nearest_ensembl=ENSG00000148334 | |nearest_ensembl=ENSG00000148334 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_198938 |
|nearest_refseq=NM_025072 | |nearest_refseq=NM_025072 | ||
|nearest_unigene=Hs.495219 | |nearest_unigene=Hs.495219 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=128128383 | |start=128128383 | ||
|start_of_center_position=128128417 | |start_of_center_position=128128417 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000476748.5 | + | |transcript_name=ENST00000476748.5 AK301618 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102663.1 | |tss_id=hg_102663.1 | ||
Revision as of 17:09, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 128128417 |
|---|---|
| End of the center position in the TSS region: | 128128418 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000476748.5 AK301618 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000476748.5:0 AK301618:0 ENST00000277462.9:-11 NM_198938:-11 AK057049:-11 ENST00000617202.4:196 NM_001256335:196 ENST00000487063.5:238 ENST00000485237.1:270 BC011613:487 |
TATA-Box annotation
| Distance to TSS: | 45 |
|---|---|
| Nearest PromoterID: | NM_198938 |
| Entrez ID: | 80142 |
| Nearest Unigene: | Hs.495219 |
| Nearest Refseq: | NM_025072 |
| Nearest Ensembl: | ENSG00000148334 |
| Gene Name: | prostaglandin E synthase 2 |
| Gene Alias: | C9orf15|GBF-1|GBF1|PGES2|mPGES-2 |
| Gene Description: | prostaglandin E synthase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
