Difference between revisions of "TSS:Hg 102679.1"
From referenceTSS
| Line 2: | Line 2: | ||
|NP94= | |NP94= | ||
|ZNF356= | |ZNF356= | ||
| − | |all_trans=ENST00000538431.5 | + | |all_trans=ENST00000538431.5:-29 ENST00000324544.6:124 NM_001257975:-194 AK296363:-194 ENST00000357558.9:312 AK292713:321 AK316393:321 ENST00000372938.10:329 ENST00000629610.2:329 NM_001131018:329 NM_001131017:329 NM_001257976:329 NM_001131016:329 AK303288:329 AK303636:329 AK027287:329 ENST00000372954.5:333 BC021163:333 ENST00000467178.5:344 ENST00000476727.6:351 AB030835:355 ENST00000488559.6:413 ENST00000420484.2:449 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| Line 11: | Line 11: | ||
|entrez_id=25792 | |entrez_id=25792 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=LSFR1 | + | |gene_alias=LSFR1{{!}}NP94{{!}}ZNF356 |
|gene_description=CDKN1A interacting zinc finger protein 1 | |gene_description=CDKN1A interacting zinc finger protein 1 | ||
|gene_id=25792 | |gene_id=25792 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_012127 | |nearest_refseq=NM_012127 | ||
|nearest_unigene=Hs.212395 | |nearest_unigene=Hs.212395 | ||
| − | |num_trans= | + | |num_trans=23 |
|species=human | |species=human | ||
|start=128191900 | |start=128191900 | ||
|start_of_center_position=128191905 | |start_of_center_position=128191905 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000538431.5 | + | |transcript_name=ENST00000538431.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102679.1 | |tss_id=hg_102679.1 | ||
Revision as of 17:09, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 128191905 |
|---|---|
| End of the center position in the TSS region: | 128191906 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000538431.5 |
|---|---|
| Distance: | -29 |
| Num_trans: | 23 |
| All_trans: | ENST00000538431.5:-29 ENST00000324544.6:124 NM_001257975:-194 AK296363:-194 ENST00000357558.9:312 AK292713:321 AK316393:321 ENST00000372938.10:329 ENST00000629610.2:329 NM_001131018:329 NM_001131017:329 NM_001257976:329 NM_001131016:329 AK303288:329 AK303636:329 AK027287:329 ENST00000372954.5:333 BC021163:333 ENST00000467178.5:344 ENST00000476727.6:351 AB030835:355 ENST00000488559.6:413 ENST00000420484.2:449 |
TATA-Box annotation
| Distance to TSS: | 199 |
|---|---|
| Nearest PromoterID: | NM_001257975 |
| Entrez ID: | 25792 |
| Nearest Unigene: | Hs.212395 |
| Nearest Refseq: | NM_012127 |
| Nearest Ensembl: | ENSG00000148337 |
| Gene Name: | CDKN1A interacting zinc finger protein 1 |
| Gene Alias: | LSFR1|NP94|ZNF356 |
| Gene Description: | CDKN1A interacting zinc finger protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
