Difference between revisions of "TSS:Hg 102688.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AY882313:-304 LG005857:-304 LG053553:-304 LG051691:-365 | + | |all_trans=AY882313:-304 LF137795:-304 LF160925:-304 LF162760:-304 LF953512:-304 LG005857:-304 LG053553:-304 LG240792:-304 LP726741:-304 LP819011:-304 LP938953:-304 LQ070227:-304 LV470877:-304 LY405109:-304 LZ233810:-304 MA260348:-304 MA643728:-304 MA731612:-304 MS673354:-304 MS834405:-304 MS901621:-304 MA800781:-304 MP129567:-304 MP162490:-304 LQ071298:-306 MA644799:-306 MA732683:-306 MA801852:-306 LQ938814:-326 LQ938813:-347 LF714705:-365 LF714892:-365 LF856639:-365 LF856826:-365 LG051691:-365 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-278 | |distance_to_tss=-278 | ||
|end=128392349 | |end=128392349 | ||
| + | |end_of_center_position=128392343 | ||
|entrez_id=100616335 | |entrez_id=100616335 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=MIR2964A | + | |gene_alias=MIR2964A{{!}}hsa-mir-219b{{!}}mir-219b |
|gene_description=microRNA 219b | |gene_description=microRNA 219b | ||
|gene_name=MIR219B | |gene_name=MIR219B | ||
| Line 18: | Line 19: | ||
|nearest_refseq=NR_039815 | |nearest_refseq=NR_039815 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=35 |
|species=human | |species=human | ||
|start=128392336 | |start=128392336 | ||
| + | |start_of_center_position=128392342 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=AY882313 LG005857 LG053553 | + | |transcript_name=AY882313 LF137795 LF160925 LF162760 LF953512 LG005857 LG053553 LG240792 LP726741 LP819011 LP938953 LQ070227 LV470877 LY405109 LZ233810 MA260348 MA643728 MA731612 MS673354 MS834405 MS901621 MA800781 MP129567 MP162490 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102688.1 | |tss_id=hg_102688.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:09, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 128392342 |
|---|---|
| End of the center position in the TSS region: | 128392343 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AY882313 LF137795 LF160925 LF162760 LF953512 LG005857 LG053553 LG240792 LP726741 LP819011 LP938953 LQ070227 LV470877 LY405109 LZ233810 MA260348 MA643728 MA731612 MS673354 MS834405 MS901621 MA800781 MP129567 MP162490 |
|---|---|
| Distance: | -304 |
| Num_trans: | 35 |
| All_trans: | AY882313:-304 LF137795:-304 LF160925:-304 LF162760:-304 LF953512:-304 LG005857:-304 LG053553:-304 LG240792:-304 LP726741:-304 LP819011:-304 LP938953:-304 LQ070227:-304 LV470877:-304 LY405109:-304 LZ233810:-304 MA260348:-304 MA643728:-304 MA731612:-304 MS673354:-304 MS834405:-304 MS901621:-304 MA800781:-304 MP129567:-304 MP162490:-304 LQ071298:-306 MA644799:-306 MA732683:-306 MA801852:-306 LQ938814:-326 LQ938813:-347 LF714705:-365 LF714892:-365 LF856639:-365 LF856826:-365 LG051691:-365 |
TATA-Box annotation
| Distance to TSS: | -278 |
|---|---|
| Nearest PromoterID: | NR_039815 |
| Entrez ID: | 100616335 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_039815 |
| Nearest Ensembl: | ENSG00000283335 |
| Gene Name: | MIR219B |
| Gene Alias: | MIR2964A|hsa-mir-219b|mir-219b |
| Gene Description: | microRNA 219b |
| Gene Type: | ncRNA |
| CpG%: | 0.115 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
