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Difference between revisions of "TSS:Hg 1027.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=EU832427:0 EU832342:0 AB590592:0 AK294121:29 BC007618:-296 ENST00000251296.3:-376 NM_032880:-376 uc001bau.3:-376 AK075316:-376
+
|all_trans=EU832427:0 EU832342:0 AB590592:0 AK294121:29 BC007618:-296 ENST00000251296.4:-324 NM_032880:-324 AK075316:-376
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.15
 
|cpg_percent=0.15
 
|distance=0
 
|distance=0
|distance_to_tss=389
+
|distance_to_tss=337
 
|end=18108148
 
|end=18108148
 
|end_of_center_position=18108135
 
|end_of_center_position=18108135
Line 22: Line 22:
 
|nearest_refseq=NM_032880
 
|nearest_refseq=NM_032880
 
|nearest_unigene=Hs.212511
 
|nearest_unigene=Hs.212511
|num_trans=9
+
|num_trans=8
 
|species=human
 
|species=human
 
|start=18108121
 
|start=18108121

Revision as of 17:09, 15 June 2021

Basic information about the TSS


TSS ID:hg_1027.1
Species:human
Chr:chr1
TSS Classification:yes
Start:18108121
End:18108148
Strand:+
TSS Score:1
Start of the center position in the TSS region:18108134
End of the center position in the TSS region:18108135



Gene and protein annotation


Transcript_name:EU832427 EU832342 AB590592
Distance:0
GeneID:84966
HGNC/MGI_ID:HGNC:28246
UniProt_ID:
Gene_name:immunoglobin superfamily member 21
Gene_symbol:IGSF21
Gene_synonyms:MGC15730 RP11-121A23.1
Gene_source:HGNC:28246



Transcript annotation


Transcript_name:EU832427 EU832342 AB590592
Distance:0
Num_trans:8
All_trans:EU832427:0 EU832342:0 AB590592:0 AK294121:29 BC007618:-296 ENST00000251296.4:-324 NM_032880:-324 AK075316:-376



TATA-Box annotation


Distance to TSS:337
Nearest PromoterID:NM_032880
Entrez ID:84966
Nearest Unigene:Hs.212511
Nearest Refseq:NM_032880
Nearest Ensembl:ENSG00000117154
Gene Name:immunoglobin superfamily member 21
Gene Alias:-
Gene Description:immunoglobin superfamily member 21
Gene Type:protein-coding
CpG%:0.15
GC%:0.791045
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):