Difference between revisions of "TSS:Hg 102702.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|ZNF400= | |ZNF400= | ||
| − | |all_trans= | + | |all_trans=ENST00000372667.9:0 ENST00000372663.9:0 ENST00000467312.1:0 ENST00000452105.5:0 ENST00000406904.2:0 NM_001318015:0 NM_001318023:0 NM_001318016:0 NM_001318020:0 NM_032799:0 BC009280:0 BC048251:0 AK027430:0 AK075332:0 AK092843:0 AK315746:0 HQ448571:0 KJ903475:0 CU690564:0 LF205624:-18 MA441201:-18 LF346604:180 MA582181:180 LF346602:397 MA582179:397 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=16 |
|end=128724134 | |end=128724134 | ||
|end_of_center_position=128724112 | |end_of_center_position=128724112 | ||
|entrez_id=84885 | |entrez_id=84885 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=DHHC-12 | + | |gene_alias=DHHC-12{{!}}ZNF400 |
|gene_description=zinc finger DHHC-type containing 12 | |gene_description=zinc finger DHHC-type containing 12 | ||
|gene_id=84885 | |gene_id=84885 | ||
| − | |gene_name=zinc finger DHHC-type | + | |gene_name=zinc finger DHHC-type palmitoyltransferase 12 |
|gene_source=HGNC:19159 | |gene_source=HGNC:19159 | ||
|gene_symbol=ZDHHC12 | |gene_symbol=ZDHHC12 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:19159 | |hgnc_mgi_id=HGNC:19159 | ||
|nearest_ensembl=ENSG00000160446 | |nearest_ensembl=ENSG00000160446 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001318015 |
|nearest_refseq=NM_032799 | |nearest_refseq=NM_032799 | ||
|nearest_unigene=Hs.133122 | |nearest_unigene=Hs.133122 | ||
| − | |num_trans= | + | |num_trans=25 |
|species=human | |species=human | ||
|start=128724088 | |start=128724088 | ||
|start_of_center_position=128724111 | |start_of_center_position=128724111 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000372663 | + | |transcript_name=ENST00000372667.9 ENST00000372663.9 ENST00000467312.1 ENST00000452105.5 ENST00000406904.2 NM_001318015 NM_001318023 NM_001318016 NM_001318020 NM_032799 BC009280 BC048251 AK027430 AK075332 AK092843 AK315746 HQ448571 KJ903475 CU690564 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102702.1 | |tss_id=hg_102702.1 | ||
Revision as of 17:10, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 128724111 |
|---|---|
| End of the center position in the TSS region: | 128724112 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372667.9 ENST00000372663.9 ENST00000467312.1 ENST00000452105.5 ENST00000406904.2 NM_001318015 NM_001318023 NM_001318016 NM_001318020 NM_032799 BC009280 BC048251 AK027430 AK075332 AK092843 AK315746 HQ448571 KJ903475 CU690564 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | ENST00000372667.9:0 ENST00000372663.9:0 ENST00000467312.1:0 ENST00000452105.5:0 ENST00000406904.2:0 NM_001318015:0 NM_001318023:0 NM_001318016:0 NM_001318020:0 NM_032799:0 BC009280:0 BC048251:0 AK027430:0 AK075332:0 AK092843:0 AK315746:0 HQ448571:0 KJ903475:0 CU690564:0 LF205624:-18 MA441201:-18 LF346604:180 MA582181:180 LF346602:397 MA582179:397 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NM_001318015 |
| Entrez ID: | 84885 |
| Nearest Unigene: | Hs.133122 |
| Nearest Refseq: | NM_032799 |
| Nearest Ensembl: | ENSG00000160446 |
| Gene Name: | zinc finger DHHC-type palmitoyltransferase 12 |
| Gene Alias: | DHHC-12|ZNF400 |
| Gene Description: | zinc finger DHHC-type containing 12 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
