Difference between revisions of "TSS:Hg 102709.1"
From referenceTSS
| Line 2: | Line 2: | ||
|ZYG= | |ZYG= | ||
|ZYG11BL= | |ZYG11BL= | ||
| − | |all_trans=ENST00000414921.5:0 NM_006336:0 | + | |all_trans=ENST00000291900.7:0 ENST00000414921.5:0 NM_001375959:0 NM_006336:0 NM_001375957:0 NM_001375954:0 NM_001375955:0 NM_001375958:0 BC052563:0 BC033884:17 ENST00000494461.1:222 AK314911:228 ENST00000427848.1:-466 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-2 |
|end=128771948 | |end=128771948 | ||
|end_of_center_position=128771929 | |end_of_center_position=128771929 | ||
|entrez_id=10444 | |entrez_id=10444 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=C9orf60 | + | |gene_alias=C9orf60{{!}}ZYG{{!}}ZYG11BL |
|gene_description=zyg-11 related cell cycle regulator | |gene_description=zyg-11 related cell cycle regulator | ||
|gene_id=10444 | |gene_id=10444 | ||
| − | |gene_name= | + | |gene_name=zyg-11 related cell cycle regulator |
|gene_source=HGNC:30960 | |gene_source=HGNC:30960 | ||
|gene_symbol=ZER1 | |gene_symbol=ZER1 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_006336 | |nearest_refseq=NM_006336 | ||
|nearest_unigene=Hs.147950 | |nearest_unigene=Hs.147950 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=128771909 | |start=128771909 | ||
|start_of_center_position=128771928 | |start_of_center_position=128771928 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000414921.5 NM_006336 | + | |transcript_name=ENST00000291900.7 ENST00000414921.5 NM_001375959 NM_006336 NM_001375957 NM_001375954 NM_001375955 NM_001375958 BC052563 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102709.1 | |tss_id=hg_102709.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q7Z7L7 X6RD87 | + | |uniprot_id=A0A024R8B0 Q7Z7L7 X6RD87 |
}} | }} | ||
Revision as of 17:10, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 128771928 |
|---|---|
| End of the center position in the TSS region: | 128771929 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000291900.7 ENST00000414921.5 NM_001375959 NM_006336 NM_001375957 NM_001375954 NM_001375955 NM_001375958 BC052563 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000291900.7:0 ENST00000414921.5:0 NM_001375959:0 NM_006336:0 NM_001375957:0 NM_001375954:0 NM_001375955:0 NM_001375958:0 BC052563:0 BC033884:17 ENST00000494461.1:222 AK314911:228 ENST00000427848.1:-466 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NM_006336 |
| Entrez ID: | 10444 |
| Nearest Unigene: | Hs.147950 |
| Nearest Refseq: | NM_006336 |
| Nearest Ensembl: | ENSG00000160445 |
| Gene Name: | zyg-11 related cell cycle regulator |
| Gene Alias: | C9orf60|ZYG|ZYG11BL |
| Gene Description: | zyg-11 related cell cycle regulator |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
