Difference between revisions of "TSS:Hg 102718.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK300180:-23 BC035556:-24 AY358759:-26 | + | |all_trans=AK300180:-23 BC035556:-24 AY358759:-26 ENST00000372586.4:-41 NM_014908:-41 AK225402:-44 AB029017:-57 LF205629:-65 MA441206:-65 JF432695:243 KJ904675:243 KU178553:243 KU178554:243 AB384111:244 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=-23 | |distance=-23 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-145 |
|end=128947562 | |end=128947562 | ||
|end_of_center_position=128947554 | |end_of_center_position=128947554 | ||
|entrez_id=23511 | |entrez_id=23511 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=KIAA0169 | + | |gene_alias=KIAA0169{{!}}hNup188 |
|gene_description=nucleoporin 188 | |gene_description=nucleoporin 188 | ||
|gene_id=22845 | |gene_id=22845 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_015354 | |nearest_refseq=NM_015354 | ||
|nearest_unigene=Hs.308340 | |nearest_unigene=Hs.308340 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=128947545 | |start=128947545 | ||
Revision as of 17:10, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 128947553 |
|---|---|
| End of the center position in the TSS region: | 128947554 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK300180 |
|---|---|
| Distance: | -23 |
| Num_trans: | 14 |
| All_trans: | AK300180:-23 BC035556:-24 AY358759:-26 ENST00000372586.4:-41 NM_014908:-41 AK225402:-44 AB029017:-57 LF205629:-65 MA441206:-65 JF432695:243 KJ904675:243 KU178553:243 KU178554:243 AB384111:244 |
TATA-Box annotation
| Distance to TSS: | -145 |
|---|---|
| Nearest PromoterID: | NM_015354 |
| Entrez ID: | 23511 |
| Nearest Unigene: | Hs.308340 |
| Nearest Refseq: | NM_015354 |
| Nearest Ensembl: | ENSG00000095319 |
| Gene Name: | dolichol kinase |
| Gene Alias: | KIAA0169|hNup188 |
| Gene Description: | nucleoporin 188 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
