Difference between revisions of "TSS:Hg 102719.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000372586. | + | |all_trans=ENST00000372586.4:0 NM_014908:0 LF205629:0 MA441206:0 AY358759:0 BC035556:0 AK225402:0 AB029017:0 AK300180:0 JF432695:277 KJ904675:277 KU178553:277 KU178554:277 AB384111:278 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-89 |
|end=128947640 | |end=128947640 | ||
|end_of_center_position=128947610 | |end_of_center_position=128947610 | ||
|entrez_id=23511 | |entrez_id=23511 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=KIAA0169 | + | |gene_alias=KIAA0169{{!}}hNup188 |
|gene_description=nucleoporin 188 | |gene_description=nucleoporin 188 | ||
|gene_id=22845 | |gene_id=22845 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_015354 | |nearest_refseq=NM_015354 | ||
|nearest_unigene=Hs.308340 | |nearest_unigene=Hs.308340 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=128947579 | |start=128947579 | ||
|start_of_center_position=128947609 | |start_of_center_position=128947609 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000372586 | + | |transcript_name=ENST00000372586.4 NM_014908 LF205629 MA441206 AY358759 BC035556 AK225402 AB029017 AK300180 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102719.1 | |tss_id=hg_102719.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B4DTE7 Q9UPQ8 | + | |uniprot_id=A0A0S2Z597 B4DTE7 Q9UPQ8 |
}} | }} | ||
Revision as of 17:10, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 128947609 |
|---|---|
| End of the center position in the TSS region: | 128947610 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000372586.4 NM_014908 LF205629 MA441206 AY358759 BC035556 AK225402 AB029017 AK300180 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000372586.4:0 NM_014908:0 LF205629:0 MA441206:0 AY358759:0 BC035556:0 AK225402:0 AB029017:0 AK300180:0 JF432695:277 KJ904675:277 KU178553:277 KU178554:277 AB384111:278 |
TATA-Box annotation
| Distance to TSS: | -89 |
|---|---|
| Nearest PromoterID: | NM_015354 |
| Entrez ID: | 23511 |
| Nearest Unigene: | Hs.308340 |
| Nearest Refseq: | NM_015354 |
| Nearest Ensembl: | ENSG00000095319 |
| Gene Name: | dolichol kinase |
| Gene Alias: | KIAA0169|hNup188 |
| Gene Description: | nucleoporin 188 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
