Difference between revisions of "TSS:Hg 102753.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000450050.6:0 ENST00000277459.8:0 | + | |all_trans=ENST00000450050.6:0 ENST00000277458.5:0 ENST00000277459.8:0 NM_001202403:0 NM_017873:0 NM_177999:0 BC001719:0 AK225618:0 AK000555:0 AK023004:0 AK292807:0 AK299193:0 LF346687:0 MA582264:0 BC065913:24 EU831817:97 EU831894:97 HQ448123:97 KJ900192:97 CU688098:97 JF432498:97 KJ900191:97 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=18 |
|end=129642171 | |end=129642171 | ||
|end_of_center_position=129642134 | |end_of_center_position=129642134 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:17181 | |hgnc_mgi_id=HGNC:17181 | ||
|nearest_ensembl=ENSG00000148331 | |nearest_ensembl=ENSG00000148331 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_177999 |
|nearest_refseq=NM_017873 | |nearest_refseq=NM_017873 | ||
|nearest_unigene=Hs.125037 | |nearest_unigene=Hs.125037 | ||
| − | |num_trans= | + | |num_trans=22 |
|species=human | |species=human | ||
|start=129642095 | |start=129642095 | ||
|start_of_center_position=129642133 | |start_of_center_position=129642133 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000450050.6 ENST00000277459.8 | + | |transcript_name=ENST00000450050.6 ENST00000277458.5 ENST00000277459.8 NM_001202403 NM_017873 NM_177999 BC001719 AK225618 AK000555 AK023004 AK292807 AK299193 LF346687 MA582264 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102753.1 | |tss_id=hg_102753.1 | ||
Revision as of 17:11, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 129642133 |
|---|---|
| End of the center position in the TSS region: | 129642134 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000450050.6 ENST00000277458.5 ENST00000277459.8 NM_001202403 NM_017873 NM_177999 BC001719 AK225618 AK000555 AK023004 AK292807 AK299193 LF346687 MA582264 |
|---|---|
| Distance: | 0 |
| Num_trans: | 22 |
| All_trans: | ENST00000450050.6:0 ENST00000277458.5:0 ENST00000277459.8:0 NM_001202403:0 NM_017873:0 NM_177999:0 BC001719:0 AK225618:0 AK000555:0 AK023004:0 AK292807:0 AK299193:0 LF346687:0 MA582264:0 BC065913:24 EU831817:97 EU831894:97 HQ448123:97 KJ900192:97 CU688098:97 JF432498:97 KJ900191:97 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_177999 |
| Entrez ID: | 140459 |
| Nearest Unigene: | Hs.125037 |
| Nearest Refseq: | NM_017873 |
| Nearest Ensembl: | ENSG00000148331 |
| Gene Name: | ankyrin repeat and SOCS box containing 6 |
| Gene Alias: | - |
| Gene Description: | ankyrin repeat and SOCS box containing 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
