Difference between revisions of "TSS:Hg 102760.1"
From referenceTSS
| Line 8: | Line 8: | ||
|PP1294= | |PP1294= | ||
|TP53I12= | |TP53I12= | ||
| − | |all_trans= | + | |all_trans=BC008280:15 AK311947:17 ENST00000340607.5:20 NM_004878:20 AF010316:41 ENST00000481476.1:43 AF027740:47 AF217965:47 KJ892796:48 AB590756:50 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=15 |
| − | |distance_to_tss=- | + | |distance_to_tss=-28 |
|end=129753078 | |end=129753078 | ||
|end_of_center_position=129753070 | |end_of_center_position=129753070 | ||
|entrez_id=9536 | |entrez_id=9536 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=MGST-IV | + | |gene_alias=MGST-IV{{!}}MGST1-L1{{!}}MGST1L1{{!}}MPGES{{!}}PGES{{!}}PIG12{{!}}PP102{{!}}PP1294{{!}}TP53I12{{!}}mPGES-1 |
|gene_description=prostaglandin E synthase | |gene_description=prostaglandin E synthase | ||
|gene_id=9536 | |gene_id=9536 | ||
| Line 31: | Line 31: | ||
|nearest_refseq=NM_004878 | |nearest_refseq=NM_004878 | ||
|nearest_unigene=Hs.146688 | |nearest_unigene=Hs.146688 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=129753061 | |start=129753061 | ||
|start_of_center_position=129753069 | |start_of_center_position=129753069 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC008280 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102760.1 | |tss_id=hg_102760.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:11, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 129753069 |
|---|---|
| End of the center position in the TSS region: | 129753070 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC008280 |
|---|---|
| Distance: | 15 |
| Num_trans: | 10 |
| All_trans: | BC008280:15 AK311947:17 ENST00000340607.5:20 NM_004878:20 AF010316:41 ENST00000481476.1:43 AF027740:47 AF217965:47 KJ892796:48 AB590756:50 |
TATA-Box annotation
| Distance to TSS: | -28 |
|---|---|
| Nearest PromoterID: | NM_004878 |
| Entrez ID: | 9536 |
| Nearest Unigene: | Hs.146688 |
| Nearest Refseq: | NM_004878 |
| Nearest Ensembl: | ENSG00000148344 |
| Gene Name: | prostaglandin E synthase |
| Gene Alias: | MGST-IV|MGST1-L1|MGST1L1|MPGES|PGES|PIG12|PP102|PP1294|TP53I12|mPGES-1 |
| Gene Description: | prostaglandin E synthase |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
