Difference between revisions of "TSS:Hg 102767.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|DYT1= | |DYT1= | ||
| − | |all_trans=AK294677:-3 | + | |all_trans=ENST00000651202.1:0 AK294677:-3 ENST00000351698.5:101 NM_000113:101 AK056062:103 AF007871:110 BC000674:114 AK075343:125 AK314505:132 ENST00000473084.1:133 BC014484:133 KJ896739:149 KR709744:149 KR709745:149 KJ901397:149 DQ892657:150 DQ895897:150 AB590352:151 BT006931:152 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss=- | + | |distance_to_tss=-106 |
|end=129824247 | |end=129824247 | ||
|end_of_center_position=129824242 | |end_of_center_position=129824242 | ||
|entrez_id=1861 | |entrez_id=1861 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=DQ2 | + | |gene_alias=DQ2{{!}}DYT1 |
|gene_description=torsin family 1 member A | |gene_description=torsin family 1 member A | ||
|gene_id=1861 | |gene_id=1861 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_000113 | |nearest_refseq=NM_000113 | ||
|nearest_unigene=Hs.534312 | |nearest_unigene=Hs.534312 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=129824236 | |start=129824236 | ||
|start_of_center_position=129824241 | |start_of_center_position=129824241 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000651202.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102767.1 | |tss_id=hg_102767.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A494BZT7 |
}} | }} | ||
Revision as of 17:11, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 129824241 |
|---|---|
| End of the center position in the TSS region: | 129824242 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000651202.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000651202.1:0 AK294677:-3 ENST00000351698.5:101 NM_000113:101 AK056062:103 AF007871:110 BC000674:114 AK075343:125 AK314505:132 ENST00000473084.1:133 BC014484:133 KJ896739:149 KR709744:149 KR709745:149 KJ901397:149 DQ892657:150 DQ895897:150 AB590352:151 BT006931:152 |
TATA-Box annotation
| Distance to TSS: | -106 |
|---|---|
| Nearest PromoterID: | NM_000113 |
| Entrez ID: | 1861 |
| Nearest Unigene: | Hs.534312 |
| Nearest Refseq: | NM_000113 |
| Nearest Ensembl: | ENSG00000136827 |
| Gene Name: | torsin family 1 member A |
| Gene Alias: | DQ2|DYT1 |
| Gene Description: | torsin family 1 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
