Difference between revisions of "TSS:Hg 10277.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=24768 |entrez_id=148345 |gc_percent=0.467662 |gene_alias=- |gene_description=chromosome 1 open reading frame 127 |gene_name=C1o...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr1 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=9418 | ||
| + | |end=10957290 | ||
| + | |end_of_center_position=10957270 | ||
|entrez_id=148345 | |entrez_id=148345 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000175262 | |nearest_ensembl=ENSG00000175262 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001366227 |
|nearest_refseq=NM_173507 | |nearest_refseq=NM_173507 | ||
|nearest_unigene=Hs.127026 | |nearest_unigene=Hs.127026 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=10957248 | ||
| + | |start_of_center_position=10957269 | ||
| + | |strand=- | ||
| + | |tata_box=-100(CTTTAAATAGCC,+,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10277.1 | |tss_id=hg_10277.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:11, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 10957269 |
|---|---|
| End of the center position in the TSS region: | 10957270 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 9418 |
|---|---|
| Nearest PromoterID: | NM_001366227 |
| Entrez ID: | 148345 |
| Nearest Unigene: | Hs.127026 |
| Nearest Refseq: | NM_173507 |
| Nearest Ensembl: | ENSG00000175262 |
| Gene Name: | C1orf127 |
| Gene Alias: | - |
| Gene Description: | chromosome 1 open reading frame 127 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -100(CTTTAAATAGCC,+,0.00) |
