Difference between revisions of "TSS:Hg 102793.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=35639 |entrez_id=23048 |gc_percent=0.402985 |gene_alias=FBP17 |gene_description=formin binding protein 1 |gene_name=FNBP1 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance_to_tss= | + | |distance=NA |
| + | |distance_to_tss=35634 | ||
| + | |end=130007561 | ||
| + | |end_of_center_position=130007555 | ||
|entrez_id=23048 | |entrez_id=23048 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_015033 | |nearest_refseq=NM_015033 | ||
|nearest_unigene=Hs.189409 | |nearest_unigene=Hs.189409 | ||
| − | |tata_box= | + | |num_trans=0 |
| + | |species=human | ||
| + | |start=130007548 | ||
| + | |start_of_center_position=130007554 | ||
| + | |strand=- | ||
| + | |tata_box=-17(TGCTTTTTAAAG,-,0.00),-16(GCTTTTTAAAGG,-,0.00),-15(CTTTTTAAAGGG,+,0.00),-15(CTTTTTAAAGGG,-,0.00) | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_102793.1 | |tss_id=hg_102793.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:12, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 130007554 |
|---|---|
| End of the center position in the TSS region: | 130007555 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 35634 |
|---|---|
| Nearest PromoterID: | NM_015033 |
| Entrez ID: | 23048 |
| Nearest Unigene: | Hs.189409 |
| Nearest Refseq: | NM_015033 |
| Nearest Ensembl: | ENSG00000187239 |
| Gene Name: | FNBP1 |
| Gene Alias: | FBP17 |
| Gene Description: | formin binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -17(TGCTTTTTAAAG,-,0.00),-16(GCTTTTTAAAGG,-,0.00),-15(CTTTTTAAAGGG,+,0.00),-15(CTTTTTAAAGGG,-,0.00) |
