Difference between revisions of "TSS:Hg 102800.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=NA | ||
|distance_to_tss=15394 | |distance_to_tss=15394 | ||
| + | |end=130128828 | ||
| + | |end_of_center_position=130128825 | ||
|entrez_id=401554 | |entrez_id=401554 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias= | + | |gene_alias=LncGPR107 |
| − | |gene_description= | + | |gene_description=GPR107 adjacent cis regulating lncRNA |
| − | |gene_name= | + | |gene_name=GPRACR |
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl=ENSG00000196979 | |nearest_ensembl=ENSG00000196979 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_135124 | |nearest_refseq=NR_135124 | ||
|nearest_unigene=Hs.522437 | |nearest_unigene=Hs.522437 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=130128821 | ||
| + | |start_of_center_position=130128824 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_102800.1 | |tss_id=hg_102800.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:12, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 130128824 |
|---|---|
| End of the center position in the TSS region: | 130128825 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 15394 |
|---|---|
| Nearest PromoterID: | NR_135124 |
| Entrez ID: | 401554 |
| Nearest Unigene: | Hs.522437 |
| Nearest Refseq: | NR_135124 |
| Nearest Ensembl: | ENSG00000196979 |
| Gene Name: | GPRACR |
| Gene Alias: | LncGPR107 |
| Gene Description: | GPR107 adjacent cis regulating lncRNA |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
