Difference between revisions of "TSS:Hg 102808.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000486250.5 | + | |all_trans=ENST00000486250.5:-6 ENST00000451466.1:-7 ENST00000448616.5:57 NM_001145106:57 AK300287:89 ENST00000372338.9:-114 NM_032843:-114 ENST00000463475.1:-153 BC032953:275 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_032843 | |nearest_refseq=NM_032843 | ||
|nearest_unigene=Hs.133205 | |nearest_unigene=Hs.133205 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=130939124 | |start=130939124 | ||
|start_of_center_position=130939128 | |start_of_center_position=130939128 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000486250.5 | + | |transcript_name=ENST00000486250.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102808.1 | |tss_id=hg_102808.1 | ||
Revision as of 17:12, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 130939128 |
|---|---|
| End of the center position in the TSS region: | 130939129 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000486250.5 |
|---|---|
| Distance: | -6 |
| Num_trans: | 9 |
| All_trans: | ENST00000486250.5:-6 ENST00000451466.1:-7 ENST00000448616.5:57 NM_001145106:57 AK300287:89 ENST00000372338.9:-114 NM_032843:-114 ENST00000463475.1:-153 BC032953:275 |
TATA-Box annotation
| Distance to TSS: | -61 |
|---|---|
| Nearest PromoterID: | NM_001145106 |
| Entrez ID: | 84929 |
| Nearest Unigene: | Hs.133205 |
| Nearest Refseq: | NM_032843 |
| Nearest Ensembl: | ENSG00000130720 |
| Gene Name: | fibrinogen C domain containing 1 |
| Gene Alias: | - |
| Gene Description: | fibrinogen C domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
