Difference between revisions of "TSS:Hg 10281.1"
From referenceTSS
| Line 2: | Line 2: | ||
|MASP-2= | |MASP-2= | ||
|MASP1P1= | |MASP1P1= | ||
| − | |all_trans=NM_006610:132 NM_139208:132 AK290823:132 ENST00000400898.3 | + | |all_trans=ENST00000400897.8:132 NM_006610:132 NM_139208:132 AK290823:132 ENST00000400898.3:138 AB008047:138 ENST00000480221.1:144 BC052299:144 BC067359:144 BC080556:144 Y18281:144 Y18284:144 Y09926:148 X98400:148 Y18283:149 BC156886:246 BC156086:246 Y18282:277 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 11: | Line 11: | ||
|entrez_id=10747 | |entrez_id=10747 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=MAP19 | + | |gene_alias=MAP19{{!}}MASP-2{{!}}MASP1P1{{!}}sMAP |
|gene_description=mannan binding lectin serine peptidase 2 | |gene_description=mannan binding lectin serine peptidase 2 | ||
|gene_id=10747 | |gene_id=10747 | ||
| − | |gene_name= | + | |gene_name=MBL associated serine protease 2 |
|gene_source=HGNC:6902 | |gene_source=HGNC:6902 | ||
|gene_symbol=MASP2 | |gene_symbol=MASP2 | ||
| − | |gene_synonyms= | + | |gene_synonyms=MAp19 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:6902 | |hgnc_mgi_id=HGNC:6902 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_006610 | |nearest_refseq=NM_006610 | ||
|nearest_unigene=Hs.655645 | |nearest_unigene=Hs.655645 | ||
| − | |num_trans= | + | |num_trans=18 |
|sMAP= | |sMAP= | ||
|species=human | |species=human | ||
| Line 30: | Line 30: | ||
|start_of_center_position=11047382 | |start_of_center_position=11047382 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_006610 NM_139208 AK290823 | + | |transcript_name=ENST00000400897.8 NM_006610 NM_139208 AK290823 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10281.1 | |tss_id=hg_10281.1 | ||
Revision as of 17:12, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11047382 |
|---|---|
| End of the center position in the TSS region: | 11047383 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000400897.8 NM_006610 NM_139208 AK290823 |
|---|---|
| Distance: | 132 |
| Num_trans: | 18 |
| All_trans: | ENST00000400897.8:132 NM_006610:132 NM_139208:132 AK290823:132 ENST00000400898.3:138 AB008047:138 ENST00000480221.1:144 BC052299:144 BC067359:144 BC080556:144 Y18281:144 Y18284:144 Y09926:148 X98400:148 Y18283:149 BC156886:246 BC156086:246 Y18282:277 |
TATA-Box annotation
| Distance to TSS: | -144 |
|---|---|
| Nearest PromoterID: | NM_139208 |
| Entrez ID: | 10747 |
| Nearest Unigene: | Hs.655645 |
| Nearest Refseq: | NM_006610 |
| Nearest Ensembl: | ENSG00000009724 |
| Gene Name: | MBL associated serine protease 2 |
| Gene Alias: | MAP19|MASP-2|MASP1P1|sMAP |
| Gene Description: | mannan binding lectin serine peptidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
