Difference between revisions of "TSS:Hg 102810.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000451466 | + | |all_trans=ENST00000451466.1:40 ENST00000486250.5:41 ENST00000372338.9:-47 NM_032843:-47 ENST00000463475.1:-86 ENST00000448616.5:112 NM_001145106:112 AK300287:144 BC032953:330 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=40 | |distance=40 | ||
| − | |distance_to_tss= | + | |distance_to_tss=57 |
|end=130939200 | |end=130939200 | ||
|end_of_center_position=130939190 | |end_of_center_position=130939190 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:25922 | |hgnc_mgi_id=HGNC:25922 | ||
|nearest_ensembl=ENSG00000130720 | |nearest_ensembl=ENSG00000130720 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_032843 |
|nearest_refseq=NM_032843 | |nearest_refseq=NM_032843 | ||
|nearest_unigene=Hs.133205 | |nearest_unigene=Hs.133205 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=130939179 | |start=130939179 | ||
|start_of_center_position=130939189 | |start_of_center_position=130939189 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000451466 | + | |transcript_name=ENST00000451466.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102810.1 | |tss_id=hg_102810.1 | ||
Revision as of 17:12, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 130939189 |
|---|---|
| End of the center position in the TSS region: | 130939190 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000451466.1 |
|---|---|
| Distance: | 40 |
| Num_trans: | 9 |
| All_trans: | ENST00000451466.1:40 ENST00000486250.5:41 ENST00000372338.9:-47 NM_032843:-47 ENST00000463475.1:-86 ENST00000448616.5:112 NM_001145106:112 AK300287:144 BC032953:330 |
TATA-Box annotation
| Distance to TSS: | 57 |
|---|---|
| Nearest PromoterID: | NM_032843 |
| Entrez ID: | 84929 |
| Nearest Unigene: | Hs.133205 |
| Nearest Refseq: | NM_032843 |
| Nearest Ensembl: | ENSG00000130720 |
| Gene Name: | fibrinogen C domain containing 1 |
| Gene Alias: | - |
| Gene Description: | fibrinogen C domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
