Difference between revisions of "TSS:Hg 102827.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_033387:0 BC049388:0 | + | |all_trans=ENST00000372271.4:0 NM_033387:0 BC049388:0 AK095423:-27 BC152842:321 BC156765:321 AB528860:321 CU690620:379 KJ904173:380 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=0 |
|end=131276520 | |end=131276520 | ||
|end_of_center_position=131276510 | |end_of_center_position=131276510 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_033387 | |nearest_refseq=NM_033387 | ||
|nearest_unigene=Hs.143878 | |nearest_unigene=Hs.143878 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=131276499 | |start=131276499 | ||
|start_of_center_position=131276509 | |start_of_center_position=131276509 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_033387 BC049388 | + | |transcript_name=ENST00000372271.4 NM_033387 BC049388 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102827.1 | |tss_id=hg_102827.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q8N2W3 | + | |uniprot_id=Q5JUQ0 Q8N2W3 |
}} | }} | ||
Revision as of 17:12, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 131276509 |
|---|---|
| End of the center position in the TSS region: | 131276510 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372271.4 NM_033387 BC049388 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000372271.4:0 NM_033387:0 BC049388:0 AK095423:-27 BC152842:321 BC156765:321 AB528860:321 CU690620:379 KJ904173:380 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_033387 |
| Entrez ID: | 286336 |
| Nearest Unigene: | Hs.143878 |
| Nearest Refseq: | NM_033387 |
| Nearest Ensembl: | ENSG00000126882 |
| Gene Name: | family with sequence similarity 78 member A |
| Gene Alias: | C9orf59 |
| Gene Description: | family with sequence similarity 78 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
