Difference between revisions of "TSS:Hg 102828.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=AK095423:0 BC049388:10 ENST00000372271.4:19 NM_033387:19 BC152842:350 BC156765:350 AB528860:350 CU690620:408 KJ904173:409 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-34 |
|end=131276559 | |end=131276559 | ||
|end_of_center_position=131276544 | |end_of_center_position=131276544 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_033387 | |nearest_refseq=NM_033387 | ||
|nearest_unigene=Hs.143878 | |nearest_unigene=Hs.143878 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=131276528 | |start=131276528 | ||
|start_of_center_position=131276543 | |start_of_center_position=131276543 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK095423 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102828.1 | |tss_id=hg_102828.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:12, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 131276543 |
|---|---|
| End of the center position in the TSS region: | 131276544 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK095423 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | AK095423:0 BC049388:10 ENST00000372271.4:19 NM_033387:19 BC152842:350 BC156765:350 AB528860:350 CU690620:408 KJ904173:409 |
TATA-Box annotation
| Distance to TSS: | -34 |
|---|---|
| Nearest PromoterID: | NM_033387 |
| Entrez ID: | 286336 |
| Nearest Unigene: | Hs.143878 |
| Nearest Refseq: | NM_033387 |
| Nearest Ensembl: | ENSG00000126882 |
| Gene Name: | family with sequence similarity 78 member A |
| Gene Alias: | C9orf59 |
| Gene Description: | family with sequence similarity 78 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
