Difference between revisions of "TSS:Hg 102829.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=AK095423:412 BC049388:440 ENST00000372271.4:449 NM_033387:449 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
|distance=412 | |distance=412 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-460 |
|end=131276982 | |end=131276982 | ||
|end_of_center_position=131276971 | |end_of_center_position=131276971 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_033387 | |nearest_refseq=NM_033387 | ||
|nearest_unigene=Hs.143878 | |nearest_unigene=Hs.143878 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=131276958 | |start=131276958 | ||
|start_of_center_position=131276970 | |start_of_center_position=131276970 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK095423 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102829.1 | |tss_id=hg_102829.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:12, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 131276970 |
|---|---|
| End of the center position in the TSS region: | 131276971 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK095423 |
|---|---|
| Distance: | 412 |
| Num_trans: | 4 |
| All_trans: | AK095423:412 BC049388:440 ENST00000372271.4:449 NM_033387:449 |
TATA-Box annotation
| Distance to TSS: | -460 |
|---|---|
| Nearest PromoterID: | NM_033387 |
| Entrez ID: | 286336 |
| Nearest Unigene: | Hs.143878 |
| Nearest Refseq: | NM_033387 |
| Nearest Ensembl: | ENSG00000126882 |
| Gene Name: | family with sequence similarity 78 member A |
| Gene Alias: | C9orf59 |
| Gene Description: | family with sequence similarity 78 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
