Difference between revisions of "TSS:Hg 102838.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000372210.7:0 ENST00000372211.7 | + | |all_trans=ENST00000372210.7:0 ENST00000372211.7:0 AF125106:0 AK295471:0 AK307475:0 AF237290:1 LF205645:2 MA441222:2 AF254133:5 CR457281:5 CU677347:5 KU178794:5 KU178795:5 KU178796:5 ENST00000491309.5:-16 AK057848:-16 ENST00000459858.1:-23 BC091495:-25 ENST00000372208.7:-38 BC015547:-38 ENST00000372215.5:-42 NM_031432:-42 ENST00000494584.5:-43 AK022317:-47 NM_001318519:-54 NM_001135954:-54 NM_001261450:-54 NR_134666:-54 NR_134667:-54 NM_001261451:-54 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=63 |
|end=131531221 | |end=131531221 | ||
|end_of_center_position=131531200 | |end_of_center_position=131531200 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:14859 | |hgnc_mgi_id=HGNC:14859 | ||
|nearest_ensembl=ENSG00000130717 | |nearest_ensembl=ENSG00000130717 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_031432 |
|nearest_refseq=NM_031432 | |nearest_refseq=NM_031432 | ||
|nearest_unigene=Hs.9597 | |nearest_unigene=Hs.9597 | ||
| − | |num_trans= | + | |num_trans=30 |
|species=human | |species=human | ||
|start=131531178 | |start=131531178 | ||
|start_of_center_position=131531199 | |start_of_center_position=131531199 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000372210.7 ENST00000372211.7 | + | |transcript_name=ENST00000372210.7 ENST00000372211.7 AF125106 AK295471 AK307475 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102838.1 | |tss_id=hg_102838.1 | ||
Revision as of 17:13, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 131531199 |
|---|---|
| End of the center position in the TSS region: | 131531200 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372210.7 ENST00000372211.7 AF125106 AK295471 AK307475 |
|---|---|
| Distance: | 0 |
| Num_trans: | 30 |
| All_trans: | ENST00000372210.7:0 ENST00000372211.7:0 AF125106:0 AK295471:0 AK307475:0 AF237290:1 LF205645:2 MA441222:2 AF254133:5 CR457281:5 CU677347:5 KU178794:5 KU178795:5 KU178796:5 ENST00000491309.5:-16 AK057848:-16 ENST00000459858.1:-23 BC091495:-25 ENST00000372208.7:-38 BC015547:-38 ENST00000372215.5:-42 NM_031432:-42 ENST00000494584.5:-43 AK022317:-47 NM_001318519:-54 NM_001135954:-54 NM_001261450:-54 NR_134666:-54 NR_134667:-54 NM_001261451:-54 |
TATA-Box annotation
| Distance to TSS: | 63 |
|---|---|
| Nearest PromoterID: | NM_031432 |
| Entrez ID: | 83549 |
| Nearest Unigene: | Hs.9597 |
| Nearest Refseq: | NM_031432 |
| Nearest Ensembl: | ENSG00000130717 |
| Gene Name: | uridine-cytidine kinase 1 |
| Gene Alias: | URK1 |
| Gene Description: | uridine-cytidine kinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
