Difference between revisions of "TSS:Hg 102854.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|GRF2= | |GRF2= | ||
| + | |all_trans=NM_001377936:0 KX533477:-147 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=58440 | |distance_to_tss=58440 | ||
|end=131651403 | |end=131651403 | ||
| Line 9: | Line 10: | ||
|entrez_id=2889 | |entrez_id=2889 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias=C3G | + | |gene_alias=C3G{{!}}GRF2 |
|gene_description=Rap guanine nucleotide exchange factor 1 | |gene_description=Rap guanine nucleotide exchange factor 1 | ||
| − | |gene_name=RAPGEF1 | + | |gene_id=2889 |
| + | |gene_name=Rap guanine nucleotide exchange factor 1 | ||
| + | |gene_source=HGNC:4568 | ||
| + | |gene_symbol=RAPGEF1 | ||
| + | |gene_synonyms=C3G | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:4568 | ||
|nearest_ensembl=ENSG00000107263 | |nearest_ensembl=ENSG00000107263 | ||
|nearest_promoter_id=NM_198679 | |nearest_promoter_id=NM_198679 | ||
|nearest_refseq=NM_005312 | |nearest_refseq=NM_005312 | ||
|nearest_unigene=Hs.127897 | |nearest_unigene=Hs.127897 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=131651401 | |start=131651401 | ||
|start_of_center_position=131651402 | |start_of_center_position=131651402 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001377936 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102854.1 | |tss_id=hg_102854.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:13, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 131651402 |
|---|---|
| End of the center position in the TSS region: | 131651403 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001377936 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | NM_001377936:0 KX533477:-147 |
TATA-Box annotation
| Distance to TSS: | 58440 |
|---|---|
| Nearest PromoterID: | NM_198679 |
| Entrez ID: | 2889 |
| Nearest Unigene: | Hs.127897 |
| Nearest Refseq: | NM_005312 |
| Nearest Ensembl: | ENSG00000107263 |
| Gene Name: | Rap guanine nucleotide exchange factor 1 |
| Gene Alias: | C3G|GRF2 |
| Gene Description: | Rap guanine nucleotide exchange factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
