Difference between revisions of "TSS:Hg 102877.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|GRF2= | |GRF2= | ||
| − | |all_trans=ENST00000438647.3 | + | |all_trans=ENST00000438647.3:-16 CR749354:75 EU832841:90 GQ129245:90 AB385202:90 ENST00000372195.5:-146 NM_001377937:-148 NM_001377938:-148 NM_001304275:-148 NM_001377935:-148 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.21 | |cpg_percent=0.21 | ||
| Line 10: | Line 10: | ||
|entrez_id=2889 | |entrez_id=2889 | ||
|gc_percent=0.875622 | |gc_percent=0.875622 | ||
| − | |gene_alias=C3G | + | |gene_alias=C3G{{!}}GRF2 |
|gene_description=Rap guanine nucleotide exchange factor 1 | |gene_description=Rap guanine nucleotide exchange factor 1 | ||
|gene_id=2889 | |gene_id=2889 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_005312 | |nearest_refseq=NM_005312 | ||
|nearest_unigene=Hs.127897 | |nearest_unigene=Hs.127897 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=131739919 | |start=131739919 | ||
|start_of_center_position=131739923 | |start_of_center_position=131739923 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000438647.3 | + | |transcript_name=ENST00000438647.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102877.1 | |tss_id=hg_102877.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q5JUE9 |
}} | }} | ||
Revision as of 17:13, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 131739923 |
|---|---|
| End of the center position in the TSS region: | 131739924 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000438647.3 |
|---|---|
| Distance: | -16 |
| Num_trans: | 10 |
| All_trans: | ENST00000438647.3:-16 CR749354:75 EU832841:90 GQ129245:90 AB385202:90 ENST00000372195.5:-146 NM_001377937:-148 NM_001377938:-148 NM_001304275:-148 NM_001377935:-148 |
TATA-Box annotation
| Distance to TSS: | 20 |
|---|---|
| Nearest PromoterID: | NM_001304275 |
| Entrez ID: | 2889 |
| Nearest Unigene: | Hs.127897 |
| Nearest Refseq: | NM_005312 |
| Nearest Ensembl: | ENSG00000107263 |
| Gene Name: | Rap guanine nucleotide exchange factor 1 |
| Gene Alias: | C3G|GRF2 |
| Gene Description: | Rap guanine nucleotide exchange factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.21 |
| GC%: | 0.875622 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
